Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_G01
(658 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 32 0.35
04_04_1614 + 34786296-34786315,34787432-34788347,34788426-347889... 31 1.1
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906... 29 2.5
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 29 2.5
02_02_0093 + 6692957-6693536,6693671-6694077,6694198-6694785 29 3.3
05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281 28 5.7
05_05_0020 - 21560896-21561352,21563399-21563480,21564143-215642... 28 5.7
11_04_0221 + 15021145-15022497 27 9.9
11_02_0068 + 7991816-7992603,7995209-7997177 27 9.9
08_02_1183 - 24998698-24998913 27 9.9
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 27 9.9
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +3
Query: 333 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVV 440
L+ L+D +A +DK++ ES+NS ++ E++T + V
Sbjct: 493 LKKLSDDMAMEVDKLKCAESQNSAMQSELETLDQKV 528
>04_04_1614 +
34786296-34786315,34787432-34788347,34788426-34788950,
34789065-34789442,34790435-34790740
Length = 714
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 442 PARFPTXEGMYEHELQDARKLLDDTSREKAKLEIDLKRLYEE 567
P + +G+ L D RKLL+ + E A + D++RLY E
Sbjct: 446 PDKQKERQGLLYGSLLDERKLLESQANEAASVLSDVERLYNE 487
>02_03_0313 -
17590109-17590148,17590254-17590382,17590479-17590612,
17590779-17590841,17590920-17591070,17593372-17593424,
17593483-17593629,17593839-17594163,17594240-17594409,
17595252-17595453,17596065-17596273,17597051-17597260,
17597360-17597489,17599664-17600402,17600411-17600531
Length = 940
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/56 (25%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Frame = +3
Query: 318 QEKDALQNLNDRLAAYI-----DKVRQLESENSGLRREIQTTQEVVTREVSNIXRN 470
QE DAL+ N+R+ Y+ +K+ +L+ +++ L+ ++Q ++E + + + +N
Sbjct: 580 QEIDALETHNERIKGYLNSKKGEKLNELQEKHTQLQSDLQKSKERKEEKSAELSKN 635
>02_01_0055 +
410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 327 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVT 443
+ + NL+ RL+AY VR+L + + +++I TQ +VT
Sbjct: 586 EVVGNLSARLSAYGITVRELSGDQNLTKQQIDETQIIVT 624
>02_02_0093 + 6692957-6693536,6693671-6694077,6694198-6694785
Length = 524
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 316 CKRKMHYKISTTGWLPISIKYASWRVRIRDYVVKYKPHRRWSPAR 450
CK+ + Y S GW A W R+ D KY PHR SP +
Sbjct: 469 CKQYLPYYTSQDGWQRHF--GAKWS-RVADLKAKYDPHRILSPGQ 510
>05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281
Length = 518
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 117 CQSLLL*QKCIPLSIQKQEKL*HLHQMLVLCHQSKA 224
C L+L Q+ +P+S+ Q+ H++Q + C Q++A
Sbjct: 206 CNGLVL-QQLVPVSLSTQQDQQHMNQATLYCMQTQA 240
>05_05_0020 -
21560896-21561352,21563399-21563480,21564143-21564263,
21564424-21565074,21565206-21565338,21565677-21565728,
21566115-21566244,21567241-21567300,21567444-21567536,
21567795-21567919,21568263-21568353,21568828-21569127,
21569415-21570038
Length = 972
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 442 PARFPTXEGMYEHELQDARKLLDDTSREKAKLEIDLKR 555
P P EG+Y L + + + DDTS K ++ + +R
Sbjct: 487 PGLLPWMEGVYRLLLHERKLIQDDTSHTKRRVSMQYER 524
>11_04_0221 + 15021145-15022497
Length = 450
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 35 GSFHRLRAFY*EEQGVLSPFVWKIHYC 115
GSFHRL+A ++ G W HYC
Sbjct: 267 GSFHRLQAMTQDDGGGDHLPAWDAHYC 293
>11_02_0068 + 7991816-7992603,7995209-7997177
Length = 918
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 372 KVRQLESENSGLRREIQTTQEVVTREVSNI 461
KVR+L +N G++ I T+ +VT +V ++
Sbjct: 519 KVRRLSIQNGGIQENIVTSTHLVTSQVRSL 548
>08_02_1183 - 24998698-24998913
Length = 71
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 95 RKAKELLALLSKTHANDETSQSCRDEPKLL 6
+K ++L A+ S+ S+ CRDEP L+
Sbjct: 40 KKLEKLTAIFSRPRGVCHASEGCRDEPLLI 69
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 366 IDKVRQLESENSGLRREIQTTQEVVTREV 452
++ +R+LE ENSGL+ E++ R V
Sbjct: 272 VEHIRKLEEENSGLKLELEKANVAEQRAV 300
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,955,151
Number of Sequences: 37544
Number of extensions: 286505
Number of successful extensions: 700
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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