Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_F24
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026213-7|AAB71308.2|  151|Caenorhabditis elegans Tetra thymosi...    79   2e-15
Z93383-3|CAB07625.1|  309|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    28   5.0  
AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z46343-6|CAL36520.1|  366|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46343-5|CAA86458.2|  356|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu...    27   8.7  
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.      27   8.7  

>AF026213-7|AAB71308.2|  151|Caenorhabditis elegans Tetra thymosin
           (four thymosin repeatprotein) protein 1 protein.
          Length = 151

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
 Frame = +3

Query: 102 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 278
           ++ +LPK+  +L   + EG     L+ V+T EK VLP+ EDVA EK        IE FDS
Sbjct: 3   AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59

Query: 279 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXX 458
           ++L  T  +EK  LP  D +  EK H  L D + +F    +K T T EKN L        
Sbjct: 60  TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVL----PSPT 115

Query: 459 XXXXNKFLNGIENFDPTKLKHTET 530
                K L    +FD + L H ET
Sbjct: 116 DVAREKTLQMAASFDKSALHHVET 139



 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 37/91 (40%), Positives = 47/91 (51%)
 Frame = +3

Query: 282 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXX 461
           +LK  ET EKN LP K+ VA EK H   +  +EHFD T++  T  +EK  L         
Sbjct: 23  ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82

Query: 462 XXXNKFLNGIENFDPTKLKHTETCEKNPLPT 554
               +  + I NF    LK TET EKN LP+
Sbjct: 83  KQHLELTDKINNFPSENLKKTETIEKNVLPS 113



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 24/76 (31%), Positives = 33/76 (43%)
 Frame = +3

Query: 333 VVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTK 512
           V    K +Q L   V   +  ++K   T EKN L             + ++ IE+FD TK
Sbjct: 4   VTELPKMNQELAGAVR--EGLELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTK 61

Query: 513 LKHTETCEKNPLPTKD 560
           L  T   EK  LP+ D
Sbjct: 62  LHSTPVKEKIVLPSAD 77


>Z93383-3|CAB07625.1|  309|Caenorhabditis elegans Hypothetical
           protein F54B8.3 protein.
          Length = 309

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
 Frame = -2

Query: 527 FRVLQLSGIEVLDAVQEFVLFLLRFDSFDRGQWILFFRR-----RVLHLSLVEVFNSVQE 363
           F V+ L+ ++V  A++    F    ++ DR Q I +F+R       LH+  VE++NS  +
Sbjct: 99  FLVIALNDLKV--ALKHVSCFAYVDNTLDRYQNITYFKRFLKSEETLHVEEVEIWNSYVD 156

Query: 362 VLVGFLRC 339
            ++  LRC
Sbjct: 157 DVMTILRC 164


>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
           protein C05C9.3 protein.
          Length = 1225

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = +3

Query: 210 SAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFD 389
           S       K  + L   +E   S    H + ++KN   D ++   E   Q  L+G   F+
Sbjct: 367 SCNSTIEHKEAEELISHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFN 426

Query: 390 KTQMKH 407
             +MK+
Sbjct: 427 SPEMKN 432


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +2

Query: 287  EAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKE 427
            E   +  E+    +   R  E  PEPL R      D DE  DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539


>AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3a protein.
          Length = 923

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +1

Query: 37  FYPLPHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL 216
           F P+P    + +   +     P   TSP+SP +   S++   P VSVTS P ++      
Sbjct: 19  FSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSS---STENEPPPVSVTSPPARKRALEES 75

Query: 217 KTSPLRR 237
             +P+++
Sbjct: 76  TVTPIQQ 82


>Z46343-6|CAL36520.1|  366|Caenorhabditis elegans Hypothetical
           protein T23F11.3b protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 324 PEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWRRL 217
           P++GSS E+  + +  +  S  R + TS SSQ+ ++
Sbjct: 76  PKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111


>Z46343-5|CAA86458.2|  356|Caenorhabditis elegans Hypothetical
           protein T23F11.3a protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 324 PEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWRRL 217
           P++GSS E+  + +  +  S  R + TS SSQ+ ++
Sbjct: 76  PKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111


>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
           guidance protein 2,isoform a protein.
          Length = 2886

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 9   PDRVAECTNLLSPSSSKIY*FTMACSVSDTPSLKDLPKVATDLKS 143
           P+ V   +++LS SSS        CS+ ++ SL  +P   T L +
Sbjct: 724 PNTVTSASSILSNSSSPHQPTPSLCSLPESSSLHSIPTAMTSLST 768


>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
          Length = 2914

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 9   PDRVAECTNLLSPSSSKIY*FTMACSVSDTPSLKDLPKVATDLKS 143
           P+ V   +++LS SSS        CS+ ++ SL  +P   T L +
Sbjct: 724 PNTVTSASSILSNSSSPHQPTPSLCSLPESSSLHSIPTAMTSLST 768


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,588,437
Number of Sequences: 27780
Number of extensions: 286245
Number of successful extensions: 1132
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)