Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_F23
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p pro...   119   3e-27
AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-P...   119   3e-27
BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p pro...    89   4e-18
BT022188-1|AAY51582.1|  387|Drosophila melanogaster IP01201p pro...    30   2.4  
AE013599-935|AAF58895.1|  387|Drosophila melanogaster CG1663-PA ...    30   2.4  
X51968-1|CAA36226.1|  471|Drosophila melanogaster protein ( Dros...    29   5.5  
AE014297-3741|AAF56421.2|  807|Drosophila melanogaster CG13664-P...    29   5.5  
X04132-2|CAA27748.1|  104|Drosophila melanogaster protein ( Dros...    28   9.6  

>BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p
           protein.
          Length = 464

 Score =  119 bits (287), Expect = 3e-27
 Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 1/182 (0%)
 Frame = +3

Query: 111 TISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKD 290
           T + +I   NV+RT+D+++QLVK  +KI  E+S    +  ++F   E +   LA+I  KD
Sbjct: 34  TANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFTSEPS---LAYIDVKD 90

Query: 291 SNSKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQE 467
           ++ K +       VKG     F       P  A A    +VETV +K ++P+P  I Q +
Sbjct: 91  ASDKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVASKGIRPHPEEIRQND 144

Query: 468 DQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIYGPYANVGPFT 647
            QFVKY GNL+ YS Y T++QKT+V L++  + S T+VKPFS     I  GPY NV  F+
Sbjct: 145 KQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSSNKITLGPYENVEAFS 204

Query: 648 EK 653
           ++
Sbjct: 205 QE 206


>AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-PA
           protein.
          Length = 458

 Score =  119 bits (287), Expect = 3e-27
 Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 1/182 (0%)
 Frame = +3

Query: 111 TISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKD 290
           T + +I   NV+RT+D+++QLVK  +KI  E+S    +  ++F   E +   LA+I  KD
Sbjct: 28  TANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFTSEPS---LAYIDVKD 84

Query: 291 SNSKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQE 467
           ++ K +       VKG     F       P  A A    +VETV +K ++P+P  I Q +
Sbjct: 85  ASDKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVASKGIRPHPEEIRQND 138

Query: 468 DQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIYGPYANVGPFT 647
            QFVKY GNL+ YS Y T++QKT+V L++  + S T+VKPFS     I  GPY NV  F+
Sbjct: 139 KQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSSNKITLGPYENVEAFS 198

Query: 648 EK 653
           ++
Sbjct: 199 QE 200


>BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p
           protein.
          Length = 371

 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 42/90 (46%), Positives = 59/90 (65%)
 Frame = +3

Query: 384 AGATVNVVVETVFTKALQPYPTAITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTV 563
           A A    +VETV +K ++P+P  I Q + QFVKY GNL+ YS Y T++QKT+V L++  +
Sbjct: 24  AAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNI 83

Query: 564 ESFTKVKPFSQVDGTIIYGPYANVGPFTEK 653
            S T+VKPFS     I  GPY NV  F+++
Sbjct: 84  LSHTQVKPFSVSSNKITLGPYENVEAFSQE 113


>BT022188-1|AAY51582.1|  387|Drosophila melanogaster IP01201p
           protein.
          Length = 387

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
 Frame = +2

Query: 383 RRCHS--KCCCRNCVHQ--SFTTISDSY------NSARRPVCEICWQFVYILPVLYLH 526
           RR H   K CC +C  Q    +T+          NSAR+  C+ CW+    L +L LH
Sbjct: 304 RRTHDQPKLCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLH 361


>AE013599-935|AAF58895.1|  387|Drosophila melanogaster CG1663-PA
           protein.
          Length = 387

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
 Frame = +2

Query: 383 RRCHS--KCCCRNCVHQ--SFTTISDSY------NSARRPVCEICWQFVYILPVLYLH 526
           RR H   K CC +C  Q    +T+          NSAR+  C+ CW+    L +L LH
Sbjct: 304 RRTHDQPKLCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLH 361


>X51968-1|CAA36226.1|  471|Drosophila melanogaster protein (
           Drosophila melanogasterDNA for type I retrotransposable
           element  R1Dm.  ).
          Length = 471

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 359 CGAQGTPKRRCHSKCCCRNCVHQ 427
           CG QG    +C +   CRNC H+
Sbjct: 422 CGQQGHTAAKCQNPVDCRNCRHR 444


>AE014297-3741|AAF56421.2|  807|Drosophila melanogaster CG13664-PA
           protein.
          Length = 807

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/69 (23%), Positives = 30/69 (43%)
 Frame = +3

Query: 438 PYPTAITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIY 617
           P    +T   D   +++G  YT +    +   T ++   +  E   +  PFS V+  ++ 
Sbjct: 149 PVNVRVTDVNDNAPQWIGTPYTLTLSEVTVPGTRILQGARA-EDADQPGPFSTVEYQVLP 207

Query: 618 GPYANVGPF 644
           GPY+    F
Sbjct: 208 GPYSEYVQF 216


>X04132-2|CAA27748.1|  104|Drosophila melanogaster protein (
           Drosophila retrotransposon412 genome. ).
          Length = 104

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 453 ITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKV 581
           I++ E++ + Y GN   YSP Y  +     +++TKTV+S   V
Sbjct: 8   ISKTENKSI-YKGNFLFYSPKYKISIPKMGLIDTKTVDSTANV 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,967,114
Number of Sequences: 53049
Number of extensions: 595876
Number of successful extensions: 1367
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)