Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_F23
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical ... 95 3e-20
U41532-8|AAK68318.1| 331|Caenorhabditis elegans Hypothetical pr... 31 0.71
U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical pr... 31 0.71
U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 31 0.94
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 29 3.8
U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (gr... 28 6.7
AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical ... 28 6.7
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 27 8.8
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 27 8.8
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 27 8.8
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 27 8.8
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 27 8.8
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 27 8.8
AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin... 27 8.8
>AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical
protein T22D1.4 protein.
Length = 586
Score = 95.5 bits (227), Expect = 3e-20
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Frame = +3
Query: 129 KLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKDSNSKD- 305
K NVDRT+D ++Q+VKV + EN G L A+ + L+FI A SK
Sbjct: 20 KAANVDRTIDATSQIVKVSTLYSFENVGNGPQSKVLIALSKEESATLSFISAGIDGSKGK 79
Query: 306 LRLAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQFVKY 485
L+++E + + + V+L+ P+ GA V + + T+ L+P P+ I Q + QFV
Sbjct: 80 LKISEKPAE--KDLAVYEVDLRTPVAKGAKVTIRINLRITQVLEPLPSKIQQSDSQFVVL 137
Query: 486 VGNLYTYSPYYTSTQKTSV-ILNTKTVESFTKVKPFSQVDGTIIYGPYANVGPFTEK 653
+ Y S Y T TQKT++ + S T V P Q +IYGPY N+ F K
Sbjct: 138 HTSAYVPSLYETVTQKTTIRTTQGGKLLSATTVSPSKQETERVIYGPYVNIPAFETK 194
>U41532-8|AAK68318.1| 331|Caenorhabditis elegans Hypothetical
protein F11D5.1b protein.
Length = 331
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 501 TYSPYYTSTQKTSVILNTKTVESFTK 578
TYSP YTST SV L++K VE +K
Sbjct: 53 TYSPSYTSTSLNSVSLSSKYVEEKSK 78
>U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical
protein F11D5.1c protein.
Length = 769
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 501 TYSPYYTSTQKTSVILNTKTVESFTK 578
TYSP YTST SV L++K VE +K
Sbjct: 491 TYSPSYTSTSLNSVSLSSKYVEEKSK 516
>U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical
protein F11D5.1a protein.
Length = 812
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 501 TYSPYYTSTQKTSVILNTKTVESFTK 578
TYSP YTST SV L++K VE +K
Sbjct: 534 TYSPSYTSTSLNSVSLSSKYVEEKSK 559
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 386 RCHSKCCCRNCVHQSFTTISDSYNSARRPVC 478
RC SK C NC + F + D+ S R +C
Sbjct: 109 RCSSKDCNHNCTNTEFDPVCDTNGSVYRNLC 139
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 153 VDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLA 272
VD+ +++V +SKI + ++ S + A E KNNLA
Sbjct: 119 VDVYSEIVAALSKIDVTSTTTSKTERITKAAFETCKNNLA 158
>U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (grd
related) protein10 protein.
Length = 282
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 96 SASVDTISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSS 221
S TISS+I D T+D + V+ K+++EN SS
Sbjct: 181 SVETTTISSEISGMETDETLDKNKCSSSVLRKLMIENISDSS 222
>AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical
protein C34H4.2 protein.
Length = 449
Score = 27.9 bits (59), Expect = 6.7
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Frame = +3
Query: 282 AKDSNSKDLRLAETTVKG--YDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPY--PT 449
A D + +LRL + G Y K ++ G T+ T AL Y T
Sbjct: 49 ASDDDPSNLRLIQIITGGNTYSLADLVSTPQKITISGGLTITSTNPDAVTYALTGYIYVT 108
Query: 450 AITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTK 557
Q +D K + ++ Q T+VILNT+
Sbjct: 109 TAQQAQDPLFKVLVVTGAHTLNANGVQATTVILNTE 144
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 481 NMLAICIHTPRTI 519
+M+ +CIHTPRTI
Sbjct: 61 SMITVCIHTPRTI 73
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 481 NMLAICIHTPRTI 519
+M+ +CIHTPRTI
Sbjct: 61 SMITVCIHTPRTI 73
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 481 NMLAICIHTPRTI 519
+M+ +CIHTPRTI
Sbjct: 119 SMITVCIHTPRTI 131
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 481 NMLAICIHTPRTI 519
+M+ +CIHTPRTI
Sbjct: 119 SMITVCIHTPRTI 131
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 481 NMLAICIHTPRTI 519
+M+ +CIHTPRTI
Sbjct: 119 SMITVCIHTPRTI 131
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 481 NMLAICIHTPRTI 519
+M+ +CIHTPRTI
Sbjct: 91 SMITVCIHTPRTI 103
>AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin
protein 2 protein.
Length = 411
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 607 VPSTCEKGFTLVNDSTVFVFR 545
+PS C GFTLVN + +F+
Sbjct: 17 LPSVCTDGFTLVNGKCLMMFK 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,756,440
Number of Sequences: 27780
Number of extensions: 325052
Number of successful extensions: 943
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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