Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_F19
(667 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 151 6e-37
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 151 6e-37
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 65 4e-11
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 36 4e-06
12_01_1116 + 11914352-11914415,11915049-11915158,11915254-119152... 38 0.009
12_02_1165 + 26633371-26633679,26635183-26635276,26635732-266358... 33 0.15
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 29 3.3
12_01_0022 + 165056-165408,165477-165624,166248-166248,166305-16... 29 4.4
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 151 bits (365), Expect = 6e-37
Identities = 81/183 (44%), Positives = 113/183 (61%)
Frame = +1
Query: 118 MLVLFETPAGYAIFKLLDESKLSEIDNLYQEFNTPEGASTVVKLKNFVKFEDXXXXXXXX 297
MLVLFETPAG+A+FK+LDE KL ++++L++EF T + A VV+LK F KFE+
Sbjct: 1 MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAA 60
Query: 298 XXXIEGXXXXXXXXXXXXXXXXEVQDQLLVGDSKLGSAIREKFDLQCVSNTNVQELLRCI 477
I+ E L V DSKLG+AI+EK + C+ N+ V EL+R +
Sbjct: 61 TLIIDSKPTKGLRKFLQKHCEGET---LAVADSKLGNAIKEKLKIDCLHNSAVMELMRGL 117
Query: 478 RSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSPXXIXNTMIVQXXCXXXXXXKELNN 657
R+Q+ L++GL +++ M+LGL+HSLSRYKLKFSP + +TMI+Q KELN
Sbjct: 118 RNQLTELISGLGAQDLGPMSLGLSHSLSRYKLKFSPEKV-DTMIIQAIGLLDDLDKELNT 176
Query: 658 YIM 666
Y M
Sbjct: 177 YAM 179
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 151 bits (365), Expect = 6e-37
Identities = 81/183 (44%), Positives = 113/183 (61%)
Frame = +1
Query: 118 MLVLFETPAGYAIFKLLDESKLSEIDNLYQEFNTPEGASTVVKLKNFVKFEDXXXXXXXX 297
MLVLFETPAG+A+FK+LDE KL ++++L++EF T + A VV+LK F KFE+
Sbjct: 1 MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAA 60
Query: 298 XXXIEGXXXXXXXXXXXXXXXXEVQDQLLVGDSKLGSAIREKFDLQCVSNTNVQELLRCI 477
I+ E L V DSKLG+AI+EK + C+ N+ V EL+R +
Sbjct: 61 TLIIDSKPTKGLRKFLQKHCEGET---LAVADSKLGNAIKEKLKIDCLHNSAVMELMRGL 117
Query: 478 RSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSPXXIXNTMIVQXXCXXXXXXKELNN 657
R+Q+ L++GL +++ M+LGL+HSLSRYKLKFSP + +TMI+Q KELN
Sbjct: 118 RNQLTELISGLGAQDLGPMSLGLSHSLSRYKLKFSPEKV-DTMIIQAIGLLDDLDKELNT 176
Query: 658 YIM 666
Y M
Sbjct: 177 YAM 179
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 65.3 bits (152), Expect = 4e-11
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 6/190 (3%)
Frame = +1
Query: 115 SMLVLFETPAGYAIFKLLDESKLSE-IDNLYQEFNTPEGASTVVKLKNFVKFEDXXXXXX 291
++ +LFE+ +GY +F ++ + +D + + VKL F F
Sbjct: 2 ALYLLFESASGYGLFHAYGIDEIGQSVDAVRASVVDLDRFGKAVKLAAFTPFSSAVDALN 61
Query: 292 XXXXXIEGXXXXXXXXXXXXXXXXEVQDQ-----LLVGDSKLGSAIREKFDLQCVSNTNV 456
EG + + L V + K+GS I E + C SN V
Sbjct: 62 QCNAISEGIMTDELRSFLELNLPKPKEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEFV 121
Query: 457 QELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSPXXIXNTMIVQXXCXXXX 636
QELLR +R D ++ L K ++ LGL HS SR K+KF+ + N M++Q
Sbjct: 122 QELLRGVRLHFDRFISELKKSDLEKAQLGLGHSYSRAKVKFNVNRVDN-MVIQAIFLLDT 180
Query: 637 XXKELNNYIM 666
K++N++ M
Sbjct: 181 LDKDINSFSM 190
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 35.5 bits (78), Expect(2) = 4e-06
Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 6/152 (3%)
Frame = +1
Query: 115 SMLVLFETPAGYAIFKLLDESKLSE-IDNLYQEFNTPEGASTVVKLKNFVKFEDXXXXXX 291
++ +LFE+ +GYA+F ++ + +D + S VKL F F
Sbjct: 2 ALYLLFESASGYALFHAHGVDEIGQGVDAARASVLELQRFSKAVKLAGFSPFSSAVDALN 61
Query: 292 XXXXXIEGXXXXXXXXXXXXXXXX-----EVQDQLLVGDSKLGSAIREKFDLQCVSNTNV 456
EG + + + V + K+GS I E + C N V
Sbjct: 62 QCNAISEGIMTDELRSFLELNLPKVKEGKKAKYSVGVMEPKVGSHISEATGIPCQCNEFV 121
Query: 457 QELLRCIRSQMDSLLAGLPKKEMTAMALGLAH 552
QELLR +R D + L + T + H
Sbjct: 122 QELLRGVRLHFDHFIDQLKVVDFTFALVSTGH 153
Score = 32.7 bits (71), Expect(2) = 4e-06
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 538 LGLAHSLSRYKLKFSPXXIXNTMIVQXXCXXXXXXKELNNYIM 666
LGL HS SR K+KF+ + N M++Q K++N++ M
Sbjct: 187 LGLGHSYSRAKVKFNVNRVDN-MVIQAIFLLDTLDKDINSFSM 228
>12_01_1116 +
11914352-11914415,11915049-11915158,11915254-11915295,
11916263-11916430,11916506-11916682,11916848-11917051,
11917125-11917319
Length = 319
Score = 37.5 bits (83), Expect = 0.009
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 6/176 (3%)
Frame = +1
Query: 100 YKCASSMLVLFETPAGYAIFKLLDESKL--SEIDNLYQEFNTPEGASTVVKLKNFVKFED 273
Y C +LVLFETP+G+A+F + + + + + ++ F S + LK F + +D
Sbjct: 26 YHCLI-VLVLFETPSGFAMFGMSGDRLIQPNALQEIWANFGVDYRVSKFIWLKEFREIKD 84
Query: 274 XXXXXXXXXXXIEGXXXXXXXXXXXXXXXXEVQDQLLVGDSKLGSAIREKFDLQCVSNTN 453
I ++ VG + I + C+ +
Sbjct: 85 -------KSSAINHDTGVSCDLAEMIMKWHHPGQKMAVGKPEYKEIIERSLSVPCMFDEI 137
Query: 454 VQELLRCIRSQMDSLL----AGLPKKEMTAMALGLAHSLSRYKLKFSPXXIXNTMI 609
V E++ +++ M L+ L K + M+ GL L+RY L P + +++I
Sbjct: 138 VMEVMWGLKNLMHVLVPQEKMKLSKDDYLPMSQGLYMLLNRYGLDVKPEMVTDSII 193
>12_02_1165 +
26633371-26633679,26635183-26635276,26635732-26635822,
26636112-26636199,26636300-26636341,26636648-26636809,
26636915-26637094,26637280-26637447,26637977-26638195
Length = 450
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 124 VLFETPAGYAIFKLLDESKLSEIDNLYQEFNTPEGASTVVKLKNFVKFED 273
+LFETP+G+A+F++ D ++++ F P A VV+ F++ D
Sbjct: 172 MLFETPSGFAMFRVSD-VLFRYPEDIWSSFTDPHTAHQVVRTIGFIEVGD 220
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 124 VLFETPAGYAIFKLLDESKLSEIDNLYQEFNTPEGASTVVKLKNFVK 264
+LFETP+G+ +F++ D ++++ F P A V+ F++
Sbjct: 360 MLFETPSGFVMFRVSD-VLFRYPEDIWSSFTDPRTAHQAVRTIGFIE 405
>12_01_0022 +
165056-165408,165477-165624,166248-166248,166305-166602,
166819-167387,167554-168377
Length = 730
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 159 KYGIARRCLE*NQHTGSTLIQLFN-KYNQYHLIY*VSSRKILS 34
+Y I+ C E H STLI LFN N+Y V RK+LS
Sbjct: 351 RYCISHECKEDVLHHLSTLIVLFNPDQNKYENYKIVGRRKLLS 393
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,019,771
Number of Sequences: 37544
Number of extensions: 253594
Number of successful extensions: 465
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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