Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_F14
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    36   4e-04
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   5.9  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              22   5.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.9  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   7.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   7.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   7.8  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   7.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.8  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 16/47 (34%), Positives = 31/47 (65%)
 Frame = +3

Query: 267 KVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISR 407
           +V L+TGA+SGIG+ L     G+G K+I  + +  +++ + ++L S+
Sbjct: 8   EVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSK 54


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 177 YIGVPFVVGVTMYGV-INHLLQKKRRSTL 260
           Y G P  VGVTMY + I+ L + K   TL
Sbjct: 31  YGGPPVEVGVTMYVLSISSLSEVKMDFTL 59


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 121 KTLYLLYYFCIC 86
           KT+ L++ FC+C
Sbjct: 2   KTIVLIFGFCVC 13


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 377 EFSFPPRSKDN 345
           E  FPPRSK N
Sbjct: 425 ELGFPPRSKKN 435


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 121 KTLYLLYYFCIC 86
           KT+ +++ FCIC
Sbjct: 2   KTIVVIFAFCIC 13


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 121 KTLYLLYYFCIC 86
           KT+ +++ FCIC
Sbjct: 2   KTIVVIFAFCIC 13


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 327 YGQGCKIILASRRKRELERVKQDL 398
           YG  C+I +  RRK +  R+K+ L
Sbjct: 225 YGNNCEIDMYMRRKCQECRLKKCL 248


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 327 YGQGCKIILASRRKRELERVKQDL 398
           YG  C+I +  RRK +  R+K+ L
Sbjct: 22  YGNNCEIDMYMRRKCQECRLKKCL 45


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 579 AESTTGSETRPTEKIRR 629
           A  TTG+ T PT ++R+
Sbjct: 252 AAMTTGTTTIPTRRLRK 268


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,884
Number of Sequences: 438
Number of extensions: 3874
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)