Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_F13
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 465  RDISRDTSGQYPSVNEHENWRFIRE 391
            R I  DTS  Y  V    NW + R+
Sbjct: 2311 RPIGTDTSDDYKVVCYFTNWAWYRQ 2335


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 45  EILYEFPCXNESFHKNHY 98
           E L ++ C NE   KNHY
Sbjct: 329 EQLRKYLCKNEDETKNHY 346


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 45  EILYEFPCXNESFHKNHY 98
           E L ++ C NE   KNHY
Sbjct: 221 EQLRKYLCKNEDETKNHY 238


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 467 YPAKSLYPAGVKTXIVGYDLCPAVTLAEV 553
           YP   + PAG+     G +L P VT  ++
Sbjct: 179 YPNFGVPPAGIPLQNPGLNLNPPVTQTQL 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,832
Number of Sequences: 336
Number of extensions: 3160
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)