Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_F13
(652 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089670-1|AAL90408.1| 300|Drosophila melanogaster RH42281p pro... 56 4e-08
AE014134-1102|AAF52391.1| 300|Drosophila melanogaster CG9542-PA... 56 4e-08
X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin prot... 29 5.5
AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p pro... 29 5.5
AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC... 29 5.5
AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB... 29 5.5
AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA... 29 5.5
EF587234-1|ABQ85891.1| 981|Drosophila melanogaster MCPH1 isofor... 29 7.2
AY122187-1|AAM52699.1| 826|Drosophila melanogaster LD43341p pro... 29 7.2
AE013599-1361|AAF58607.3| 779|Drosophila melanogaster CG8981-PA... 29 7.2
AE013599-1360|AAF58605.3| 826|Drosophila melanogaster CG8981-PB... 29 7.2
U62547-1|AAC47658.1| 1145|Drosophila melanogaster mitochondrial ... 28 9.6
U60298-1|AAC47290.1| 1145|Drosophila melanogaster DNA polymerase... 28 9.6
AY089226-1|AAL89964.1| 1145|Drosophila melanogaster AT02241p pro... 28 9.6
AE014134-2406|AAF53338.1| 1145|Drosophila melanogaster CG8987-PA... 28 9.6
>AY089670-1|AAL90408.1| 300|Drosophila melanogaster RH42281p
protein.
Length = 300
Score = 56.0 bits (129), Expect = 4e-08
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 431 GYWPDVSREISRYPAKSLYPAGVKTXIVGYDLCPAVTLAEVVNXIQNAARYIFEYAEKMN 610
GYW ++ +S L G + ++ Y+LCP VTL +++ + +IF+Y E
Sbjct: 88 GYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTK 147
Query: 611 SXGVYFAGHGTGAH 652
+ FAGH GAH
Sbjct: 148 VSSLTFAGHSAGAH 161
>AE014134-1102|AAF52391.1| 300|Drosophila melanogaster CG9542-PA
protein.
Length = 300
Score = 56.0 bits (129), Expect = 4e-08
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 431 GYWPDVSREISRYPAKSLYPAGVKTXIVGYDLCPAVTLAEVVNXIQNAARYIFEYAEKMN 610
GYW ++ +S L G + ++ Y+LCP VTL +++ + +IF+Y E
Sbjct: 88 GYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTK 147
Query: 611 SXGVYFAGHGTGAH 652
+ FAGH GAH
Sbjct: 148 VSSLTFAGHSAGAH 161
>X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin
protein.
Length = 1023
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 370 LDIFGTDLPNESPILVFIHGWIL 438
LDI+ + N+ P+LVF+HG +L
Sbjct: 148 LDIYAPEGANQLPVLVFVHGEML 170
>AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p
protein.
Length = 1026
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 370 LDIFGTDLPNESPILVFIHGWIL 438
LDI+ + N+ P+LVF+HG +L
Sbjct: 148 LDIYAPEGANQLPVLVFVHGEML 170
>AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC,
isoform C protein.
Length = 1026
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 370 LDIFGTDLPNESPILVFIHGWIL 438
LDI+ + N+ P+LVF+HG +L
Sbjct: 148 LDIYAPEGANQLPVLVFVHGEML 170
>AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB,
isoform B protein.
Length = 1026
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 370 LDIFGTDLPNESPILVFIHGWIL 438
LDI+ + N+ P+LVF+HG +L
Sbjct: 148 LDIYAPEGANQLPVLVFVHGEML 170
>AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA,
isoform A protein.
Length = 1026
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 370 LDIFGTDLPNESPILVFIHGWIL 438
LDI+ + N+ P+LVF+HG +L
Sbjct: 148 LDIYAPEGANQLPVLVFVHGEML 170
>EF587234-1|ABQ85891.1| 981|Drosophila melanogaster MCPH1 isoform A
protein.
Length = 981
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 132 LXENTFAPTRKRMRYRATVTMEFVDLEREYTPVLWSNRLYT 254
L + AP ++ T F+D+E++ TP+ S RL T
Sbjct: 540 LRQENLAPRARQSLSNVTTQTSFLDVEQQVTPLFSSTRLPT 580
>AY122187-1|AAM52699.1| 826|Drosophila melanogaster LD43341p
protein.
Length = 826
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 132 LXENTFAPTRKRMRYRATVTMEFVDLEREYTPVLWSNRLYT 254
L + AP ++ T F+D+E++ TP+ S RL T
Sbjct: 587 LRQENLAPRARQSLSNVTTQTSFLDVEQQVTPLFSSTRLPT 627
>AE013599-1361|AAF58607.3| 779|Drosophila melanogaster CG8981-PA,
isoform A protein.
Length = 779
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 132 LXENTFAPTRKRMRYRATVTMEFVDLEREYTPVLWSNRLYT 254
L + AP ++ T F+D+E++ TP+ S RL T
Sbjct: 540 LRQENLAPRARQSLSNVTTQTSFLDVEQQVTPLFSSTRLPT 580
>AE013599-1360|AAF58605.3| 826|Drosophila melanogaster CG8981-PB,
isoform B protein.
Length = 826
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 132 LXENTFAPTRKRMRYRATVTMEFVDLEREYTPVLWSNRLYT 254
L + AP ++ T F+D+E++ TP+ S RL T
Sbjct: 587 LRQENLAPRARQSLSNVTTQTSFLDVEQQVTPLFSSTRLPT 627
>U62547-1|AAC47658.1| 1145|Drosophila melanogaster mitochondrial DNA
polymerase catalyticsubunit precursor protein.
Length = 1145
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +1
Query: 229 CCGRTGY--IPRSIA---STCTSTLITAES--EIATXNVPHKLEIEYGSTPGQXLDI 378
C R G +P S+A S T++ E + T + PH L I YG PGQ L +
Sbjct: 1068 CVSRIGLQDLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSV 1124
>U60298-1|AAC47290.1| 1145|Drosophila melanogaster DNA polymerase
gamma protein.
Length = 1145
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +1
Query: 229 CCGRTGY--IPRSIA---STCTSTLITAES--EIATXNVPHKLEIEYGSTPGQXLDI 378
C R G +P S+A S T++ E + T + PH L I YG PGQ L +
Sbjct: 1068 CVSRIGLQDLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSV 1124
>AY089226-1|AAL89964.1| 1145|Drosophila melanogaster AT02241p protein.
Length = 1145
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +1
Query: 229 CCGRTGY--IPRSIA---STCTSTLITAES--EIATXNVPHKLEIEYGSTPGQXLDI 378
C R G +P S+A S T++ E + T + PH L I YG PGQ L +
Sbjct: 1068 CVSRIGLQDLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSV 1124
>AE014134-2406|AAF53338.1| 1145|Drosophila melanogaster CG8987-PA
protein.
Length = 1145
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +1
Query: 229 CCGRTGY--IPRSIA---STCTSTLITAES--EIATXNVPHKLEIEYGSTPGQXLDI 378
C R G +P S+A S T++ E + T + PH L I YG PGQ L +
Sbjct: 1068 CVSRIGLQDLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSV 1124
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,929,784
Number of Sequences: 53049
Number of extensions: 567324
Number of successful extensions: 1270
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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