Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_F13
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29377-10|AAA68717.1|  140|Caenorhabditis elegans Hypothetical p...    29   2.9  
U41011-7|AAA82290.1|  271|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z48621-7|CAA88546.1|  770|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF047658-2|ABC71829.1|  170|Caenorhabditis elegans Hypothetical ...    28   6.6  
AF016664-9|AAB66065.2|  320|Caenorhabditis elegans Serpentine re...    28   6.6  
AC006777-7|AAK72306.2|  367|Caenorhabditis elegans Seven tm rece...    27   8.7  

>U29377-10|AAA68717.1|  140|Caenorhabditis elegans Hypothetical
           protein K05F1.10 protein.
          Length = 140

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 137 RKHLRSDAKEDEIQGDGHHGICG 205
           R H+RS+ K +E Q   HH ICG
Sbjct: 41  RIHVRSERKAEECQKHEHHLICG 63


>U41011-7|AAA82290.1|  271|Caenorhabditis elegans Hypothetical
           protein D2024.2 protein.
          Length = 271

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 322 VPHKLEIEYGSTPGQXLDIFGTDLPNESPILVFIHG 429
           +P K  + YG    Q +DI+G D  ++  +L+FIHG
Sbjct: 43  IPRKENVAYGMEENQKVDIWG-DASDK--LLIFIHG 75


>Z48621-7|CAA88546.1|  770|Caenorhabditis elegans Hypothetical
           protein R07B1.9 protein.
          Length = 770

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 226 GVYSLSKSTNSMVTVALYLILFRVG 152
           G YSL ++  S+VT +LYL+ F +G
Sbjct: 60  GFYSLWRNHGSIVTKSLYLVSFVIG 84


>AF047658-2|ABC71829.1|  170|Caenorhabditis elegans Hypothetical
           protein K03H6.7 protein.
          Length = 170

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 419 SFTDGYWPDVSREISRYPAKSLYPA 493
           S TDGYW   S+E +R P    YPA
Sbjct: 124 SVTDGYWSTFSKE-TRMPFVCYYPA 147


>AF016664-9|AAB66065.2|  320|Caenorhabditis elegans Serpentine
           receptor, class i protein71 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 398 MNLQFSCSFTDGYWPDVSREISRYPAKSLYPAGVKTXIVG 517
           +  Q SC  TD     +S+ IS YP  + Y  GV + I G
Sbjct: 49  LGFQISCMLTDIQLNLLSQPISLYPLLAGYTQGVMSTIFG 88


>AC006777-7|AAK72306.2|  367|Caenorhabditis elegans Seven tm
           receptor protein 222 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 86  QKSLLNLNDFLRYTYFXRKHLRSDAKEDEIQGDGH 190
           +++LLN   +++  +  RKH+ SD +      DGH
Sbjct: 314 RRALLNYLRWIKNRFLCRKHVVSDVRNASYYTDGH 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,196,185
Number of Sequences: 27780
Number of extensions: 288972
Number of successful extensions: 695
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)