Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_F13
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.48 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.9  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   5.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/78 (19%), Positives = 32/78 (41%)
 Frame = +1

Query: 139 KTPSLRRERG*DTGRRSPWNLWIWKENTHRCCGRTGYIPRSIASTCTSTLITAESEIATX 318
           K P  ++E   D G+ S   L  W+++      +  Y+ RS+        +    ++   
Sbjct: 209 KVPEKKKEDEIDEGKESKTKLSQWRKDGGTVKKKVNYVYRSVDQVLEDGKLKPNKKVRIS 268

Query: 319 NVPHKLEIEYGSTPGQXL 372
           N   K+++   + P Q +
Sbjct: 269 NEMSKVKVIDMTGPEQRI 286


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 172 DTGRRSPWNLWIWKE 216
           DT RR+PW    W+E
Sbjct: 273 DTNRRNPWFSEYWEE 287


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 172 DTGRRSPWNLWIWKE 216
           DT RR+PW    W+E
Sbjct: 363 DTNRRNPWFSEYWEE 377


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/29 (27%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 370 LDIFGTDLPNESPILVFIH-GWILAGRVS 453
           LD++   L    P++ ++H G  ++G  S
Sbjct: 7   LDVYTNSLDQSKPVMFYVHEGAFISGTSS 35


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 415 RELEIHSGGRYRKCPXSVRALIRT 344
           R + IH+G R  KC    +  I++
Sbjct: 165 RHMRIHTGERPHKCTVCSKTFIQS 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,707
Number of Sequences: 438
Number of extensions: 3658
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)