Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_F09
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 39 0.003
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 35 0.050
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 35 0.067
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 33 0.27
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 32 0.35
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 32 0.47
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 31 1.1
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 31 1.1
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 31 1.1
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 31 1.1
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 30 1.9
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 30 1.9
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 29 2.5
SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7) 29 2.5
SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15) 29 2.5
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20) 29 2.5
SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_1745| Best HMM Match : LexA_DNA_bind (HMM E-Value=1.9) 29 3.3
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_16158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.8
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 5.8
SB_26484| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 28 7.6
SB_28865| Best HMM Match : DUF1565 (HMM E-Value=1.3) 28 7.6
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 28 7.6
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 28 7.6
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/97 (28%), Positives = 49/97 (50%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNV 519
KAKE ++Q E + + EK+ LREK+Q+ + ++ S+KL + + +
Sbjct: 1614 KAKEKIKQGSARQEEQTKKYKAYQEKREKDVAELREKVQSLEKELMETSEKLREDLRGS- 1672
Query: 520 QETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ 630
++ E+L K++A N Q + KKI E + KQ
Sbjct: 1673 EKREEELKLKLEAG----ESNNQAIDKKIAELSAEKQ 1705
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = +1
Query: 334 NGKAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSS 513
N + EAL+ + + E+ + +K+ TAL+E+L + VQ +E +K +
Sbjct: 642 NNELNEALQAAETKNKAMEKEIDALKQNKDKDVTALKEELTSEVQKYKEEKLMAEEKHLA 701
Query: 514 NVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQ 609
Q + K+ ++ K E I ++Q
Sbjct: 702 EAQSIKVEYEKKV----EEHIKEKNEAISQLQ 729
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/104 (25%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Frame = +1
Query: 346 KEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNVQE 525
+E+L+ SR + ER ++ + E + T ++E LQA + V QKL + + N +
Sbjct: 367 EESLKASRSDNERLQTQINSIQAESETSKTEVKEVLQALEELAVNYDQKLQEVDAKN--K 424
Query: 526 TNEKLAPKIKAAYDDFAKNTQEVIKKIQEAAN--AKQ*ASILNS 651
N+KL +I + +K T + +++++++++ ++ A ++NS
Sbjct: 425 ENDKLNDEITTKQVELSKTT-KALEEVRDSSSILRRRLAEMMNS 467
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 35.1 bits (77), Expect = 0.050
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +1
Query: 355 LEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNT---VQESQKLAKKVSSNVQE 525
+ ++++ ++ T +++ +V++ T + E + VQ T VQE++K ++ + V E
Sbjct: 1293 VNETKKEVQETKKDVQETKKEVDETKTKVDET-KKEVQETKKDVQETKKEVQETKTKVDE 1351
Query: 526 TNEKLAPKIKAAYDDFAKNTQEVIKKIQEAA 618
TN+++ + K + K+ EV K+ E A
Sbjct: 1352 TNKEV-QETKKEIQETKKDVHEVKGKVSEMA 1381
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 35.1 bits (77), Expect = 0.050
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNT--VQESQKLAKKVSS 513
KAKEAL + + ++ T +L+ AH + + L+ K +N + ++L K+
Sbjct: 1829 KAKEALSKENKELKGTVEQLQDAHEKLSEENRLLKRKENEQSENVDDFESGEELQLKI-K 1887
Query: 514 NVQETNEKLAPKIKAA 561
+ E NE L+ +++ A
Sbjct: 1888 ELNEKNESLSSQLREA 1903
Score = 31.1 bits (67), Expect = 0.82
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Frame = +1
Query: 322 LGDANGKAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAK 501
L + N K K+ALE+ R+ ++ E + D+E+ L ++ + +E+++L K
Sbjct: 1961 LAEQNEKLKDALEELREAVQHLWDEKKEKERDIEQ----LNSQISSGDVQGYEETEEL-K 2015
Query: 502 KVSSNVQETNEKLAPKIKAAYDDFA------KNTQEVIKKIQEAANAK 627
S +++ N KL + + D EVIK++Q A K
Sbjct: 2016 AQLSQLRDQNNKLDNDLASQSRDVITLKEENDKANEVIKQLQRALVGK 2063
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 34.7 bits (76), Expect = 0.067
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +1
Query: 355 LEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKK--VSSNVQET 528
L Q R+N E L+ +EK +LR++L V Q + +L K + +V E
Sbjct: 103 LTQERENYETREKTLQSKITSIEKENNSLRDELNKTVSELTQTTAELQDKQTMLESVHER 162
Query: 529 NEKLAPKIKAA-------YDDFAKNTQEVIKKIQEA 615
N L +++ YD + Q + K++ EA
Sbjct: 163 NSDLERRLQDCKLSGNDKYDSLERERQTLEKRLSEA 198
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Frame = +1
Query: 322 LGDANGKAKEALEQSRQNIERTAXELRX-AHPDVEKNATALREKLQAXVQNTVQESQKLA 498
LGD + + + + ++ EL+ VEK A L+EK Q + V + ++
Sbjct: 528 LGDVEMQVQAFKAEKEKEVKFIEDELKKQCKALVEKKAKELKEKYQGELNEKVNKVERTL 587
Query: 499 KKV--------SSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ 630
+K S ++ETN L K ++ + ++V ++ QE A+Q
Sbjct: 588 RKQYEEDIVKGRSELEETNRTLKEKYESEVSEIMLQMEQVQQRNQEVFEAQQ 639
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAXE-LRXAHPDVEKNATALREKLQAXVQN-TVQESQKLAKKVSS 513
+AKE E+ + +ER E L+ H +EK+ +RE + +Q + + ++L +++
Sbjct: 18 RAKEETERQAE-LERQMNERLQELHAHMEKSDKNMREAHRKQIQEISSKHKEELQQQLER 76
Query: 514 NVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ 630
Q+ +K A K+K ++ + +K+ E +N +Q
Sbjct: 77 FHQDLKKKDA-KLKTTSQEYEDRLYKTQEKLAELSNVRQ 114
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +1
Query: 328 DANGKAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKV 507
++ K +E +E R+ I T EL + +ATA +E+L++ V+ + KL K+
Sbjct: 938 ESESKLQERIESLREKI--TGLELAAIN-----DATASKEELESAVEEKAKAETKLKVKI 990
Query: 508 SSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQ 609
S+ ET K A Y+ + ++ +K+++
Sbjct: 991 SA--LETKLKKAVNETKRYESSSSQLKQQVKELE 1022
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 349 EALEQSRQNIERTAXELRXAHPDVEKNATALREK-LQAXVQNTVQESQKLAKKVSSNVQE 525
+ALE++RQ + +LR D+E NA L E+ L A ++ ++ +L+ V ++ +
Sbjct: 676 DALEENRQELVAENCQLREELADLE-NAKQLEERQLLARIETLEEDLSRLS--VKNDELD 732
Query: 526 TNEKLAPKIKAAYDDFAKNTQEVIKKIQEAA 618
++ K K +D K+ ++ I ++ ++
Sbjct: 733 KAIRICSKEKEGIEDSLKHARDQIASLESSS 763
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/98 (17%), Positives = 47/98 (47%)
Frame = +1
Query: 319 ALGDANGKAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLA 498
+L D + + L ++ ++ +LR + D N E+ + + +++LA
Sbjct: 150 SLSDVDDGEEVKLRENEAPAKQGKIQLRRSAMDAGTNKKVEEEERLTRARIQAEAAERLA 209
Query: 499 KKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQE 612
K+V+ ++E + + +++ A + ++ +KK++E
Sbjct: 210 KEVTKTLEELRKTMQKELEDAKVKLEQEKKDSVKKLKE 247
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/88 (20%), Positives = 37/88 (42%)
Frame = +1
Query: 358 EQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNVQETNEK 537
+++ +E +R H + + L K+QA +T E + LA++V +
Sbjct: 1395 DETISQLENDLKSVRQLHNETVEEKGKLEAKIQAYKISTQSEHEVLAEEVYTRYSSRTRA 1454
Query: 538 LAPKIKAAYDDFAKNTQEVIKKIQEAAN 621
+I+ Y+D ++ Q + E N
Sbjct: 1455 SIERIRQQYEDCLQDVQTRNNSVVEMEN 1482
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/67 (23%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 415 DVEKNATALREKLQAXVQNTVQ-ESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQE 591
+ E+ AL EK + T+Q E +K +K+ + ++ET E + ++++ + + + T++
Sbjct: 223 EYEEKLNALLEKEKIVEMTTLQLEDEK--EKIKNELEETKELMQAELESQAETYTEQTRK 280
Query: 592 VIKKIQE 612
+ ++QE
Sbjct: 281 MHSELQE 287
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +1
Query: 352 ALEQSRQNIERTAXELRXAHPDVEKNATALREKLQA---XVQNTVQESQKLAKKVSSNV- 519
A+++ + + + + E+R A D E+ TAL+ K+ + VQ +E ++ K V
Sbjct: 571 AVQKFQDFLTKVSAEIRRARNDSEQLETALKSKMNSHDTEVQKLYEEMEQQIKVVRDTYQ 630
Query: 520 QETNEKLAPKIKAAYDDFAKNTQEVIKK 603
QE +++A K K + +N +++++K
Sbjct: 631 QELEDEIAMKEKGEQEIKTEN-EKLLEK 657
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 439 LREKLQAXVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKI 606
L+E+ ++ + +Q+ +K K+ S Q+T APK K A TQ KI
Sbjct: 340 LKEEYKSLQRQAMQDLKKQLKQTSEAQQQTETNSAPKAKPAKPSVPSPTQTAPNKI 395
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +1
Query: 355 LEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNVQETNE 534
L++ IE+ +L A EKN L E + +QNT+Q + + E
Sbjct: 253 LQEYTDEIEKLKKDLFAAR---EKNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEA 309
Query: 535 KLAPKIKAAYDDFAKNTQ 588
A KI+A + K T+
Sbjct: 310 DFAAKIEAMEAELQKVTE 327
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Frame = +1
Query: 349 EALEQSRQNIERTA-XELRXAHPDVEKNATALR---------EKLQAXVQNTVQESQKLA 498
E EQ+RQ +E T + H +VE + L+ EKL Q TVQ+ +
Sbjct: 700 EDAEQARQALEETMHTTIEELHEEVETLRSRLQDVGQAKLEAEKLVQDTQATVQQQSEEV 759
Query: 499 KKVSSNVQETNEKLA 543
+ +SS++ N +LA
Sbjct: 760 RSLSSDIDRLNLQLA 774
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNV 519
+ +E + ++ E+ ++E+ +K + + SQKL ++ +
Sbjct: 139 RIREKRRKEKEEFEKQRKLKEDKQKEIEEKINEWIDKKNKEILKSKTSSQKLQEQKQAEK 198
Query: 520 QETNEKLAPKIKAAYDDF--AKNTQEVIKKIQEAANAKQ 630
+E N + K K A+D + K ++ KK +E A++
Sbjct: 199 EEQNRTIEEKSKIAFDKWMSEKLKRDSKKKEEEERKARE 237
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/76 (18%), Positives = 41/76 (53%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNV 519
+ K+ +++++++++ T E+ V++ ++E + VQE++K ++ + V
Sbjct: 201 ETKKEVQETKKDVQETKKEVHETKTKVDETKREVQE-----TKKDVQETKKEVQETKTKV 255
Query: 520 QETNEKLAPKIKAAYD 567
ETN+++ K ++
Sbjct: 256 DETNKEVQETKKEVHE 271
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Frame = +1
Query: 319 ALGDANGKAKE---ALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQ 489
ALG+ N ++ AL+Q ++++ K+ + L+ V E
Sbjct: 599 ALGELNSSLQQENKALKQLATSLQKGPGGPSLILQQQVKDLQQENKHLRQTVHRLNVELS 658
Query: 490 KLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAK 627
+ K + E N +L + AYDD K +E+IK + +K
Sbjct: 659 RYQAKYRPVLFEVNTRLLAPLFLAYDDRLKEKEEIIKTYDRLSKSK 704
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +1
Query: 322 LGDANGKAKEALEQSRQNIERTAXELRXAHPDVE----KNATALRE---KLQAXVQNTVQ 480
L D +EAL S+ E+T +L A + E K + E K+ +QN +
Sbjct: 409 LEDVLANKEEALRNSQDAHEQTVAKLSSAIKERETSWKKQKAEIEEHYNKIINDLQNRTK 468
Query: 481 ESQKLAKKVSSNVQET 528
++Q LA K VQET
Sbjct: 469 KTQNLADKAWEKVQET 484
>SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7)
Length = 504
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 400 RXAHPDVEKNATA-LREKLQAXVQNTVQESQKLAKKVSSNVQET-NEKLAPKIKAAYDDF 573
+ + DV++ T L EKL NT Q A +Q T N L PK D F
Sbjct: 81 KLGNKDVKERVTKELEEKLDTLAFNTEDIEQDWAL-FKDTIQSTCNNFLGPKTHCHQDWF 139
Query: 574 AKNTQEVIKKIQE 612
+N +E+ + I E
Sbjct: 140 DENNEEINRLIDE 152
>SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15)
Length = 1001
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 379 ERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNVQE---TNEKLAPK 549
++ EL A ++ + EKL + + ++E+++ V N++E + K A K
Sbjct: 655 QKLIEELEIAQNKIQTMRSQYEEKL-VLLTHKIKETEEERDHVLKNIKEHDSESSKQAAK 713
Query: 550 IKAAYDDFAKNTQEVIKKIQEA 615
+K Y+ Q +KK+Q A
Sbjct: 714 LKEEYEKKLGGLQTELKKVQAA 735
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = +1
Query: 310 SSXALGDANGKAKEALEQSRQNIERTAXE---LRXAHPDVEKNATALREKLQAXVQNTVQ 480
S L ++ AK+ L+ +++ + E LR H D ++ L++ + +
Sbjct: 586 SCKELKESLSLAKKELDSAKKESAARSNEVNLLRKKHEDEKRRLIGLKDGGDKELNRLKE 645
Query: 481 ESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ 630
E +++KKVSS V E ++ + + + + KK +E N+ +
Sbjct: 646 ELTQVSKKVSSAVSEMSD-TPDNVSNQVEKVVNELKSLKKKHEELENSSK 694
>SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20)
Length = 906
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 400 RXAHPDVEKNATA-LREKLQAXVQNTVQESQKLAKKVSSNVQET-NEKLAPKIKAAYDDF 573
+ + DV++ T L EKL NT Q A +Q T N L PK D F
Sbjct: 181 KLGNKDVKERVTKELEEKLDTLAFNTEDIEQDWAL-FKDTIQSTCNNILGPKTHCHQDWF 239
Query: 574 AKNTQEVIKKIQE 612
+N +E+ + I E
Sbjct: 240 DENNEEINRLIDE 252
>SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Frame = +1
Query: 322 LGDANGKAKEALEQSRQNIERTA---XEL---RXAHPDVEKNATALRE---KLQAXVQNT 474
L A+G KEA+EQ Q ++ A EL R + +E+ AL E KL+ ++
Sbjct: 456 LAGAHGNHKEAMEQLMQRSKQLANFKTELATTRQKNQALEEQVNALDERNRKLKGELKR- 514
Query: 475 VQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKK 603
Q+ + ++ + T E+L ++ + D + +QEV ++
Sbjct: 515 YQDRNRSSEGEAQKYARTVEELKNQLNSTQDKLMRQSQEVSRR 557
>SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1312
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +1
Query: 319 ALGDANGKAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQ---AXVQNTVQESQ 489
AL D N K +EA EQS ++ EL+ +E+ + R+KLQ + ++E++
Sbjct: 904 ALNDLNVKKEEA-EQSSRSAADVISELQAHKQVLEQEILSNRKKLQMEAVAAKQALEETK 962
Query: 490 KLAKKVSSNVQETNEKLAPKIK 555
++ S +++ +K+ ++
Sbjct: 963 LNQIRIMSELEKEKKKMQEDVE 984
>SB_1745| Best HMM Match : LexA_DNA_bind (HMM E-Value=1.9)
Length = 398
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNV 519
K KE LEQ RQN + E + ++ ++E L + +++ +KL K+ + N
Sbjct: 129 KQKELLEQERQNRIKMYRERILTNNKSDETLVQVQEDL-LKLFGKIKKDKKLLKETTHNE 187
Query: 520 QETNEKL 540
QE + L
Sbjct: 188 QEDRKAL 194
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Frame = +1
Query: 331 ANGKAKEALEQ-------SRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQ 489
AN A E LEQ SR+N ++++ + +EKN +++RE+L ++ Q
Sbjct: 730 ANSNASEKLEQLEKELLESRENEKKSSAAVTRLE-GLEKNLSSIREELATKEKDMASTVQ 788
Query: 490 KLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKI 606
+L + V T E ++ + ++E+ KKI
Sbjct: 789 QLCEVEGKLV--TRESEVKSLREELTRMQQGSEELKKKI 825
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +1
Query: 340 KAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNT-VQESQKLAK---KV 507
+ ++ L++S Q ++ L + ++N + R+ L+ VQ+T +S KL K+
Sbjct: 3488 RTQDLLDKSEQELKAAEENLVKSF---QENESLKRQMLK--VQSTSCADSVKLQADIGKL 3542
Query: 508 SSNVQETNEKLAPKIKAAYDDFAKN 582
+ +Q T + L+ KIK D FAKN
Sbjct: 3543 KTELQSTKKDLSDKIKEYNDLFAKN 3567
>SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 430 ATALREKLQAXVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQ 609
A +++ QA + T E+QKL + +++ QETNE + K + +KNTQ+ +
Sbjct: 72 AEKIKQLEQALKEKTHNETQKLDRILATCHQETNEVINSK---SISHESKNTQKRSPTLT 128
Query: 610 EAANAKQ 630
+ KQ
Sbjct: 129 MTEHCKQ 135
>SB_16158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +1
Query: 304 RVSSXALGDANGKAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQE 483
R+ S A + KEA E S +E+ + A + A + R+K V+
Sbjct: 62 RLKSEAAKEKASALKEAKEASELELEKAMATAKKAQVLLRLRARSGRDKAVKAESKRVEA 121
Query: 484 SQK--LAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQE 612
K A++V +E ++L + A +F + ++K +E
Sbjct: 122 LMKKLAAQQVQQEKEEGEKRLEEALIQARKEFDFERAQAVQKARE 166
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = +1
Query: 337 GKAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSN 516
G+AK+ + NIE+ + A +E+N A R L A + + +K+ +
Sbjct: 205 GRAKKVASKIT-NIEQAMALVEEAQQHLEENKRAARRDLDAFIDKQIGTPEKVRSDLRGE 263
Query: 517 VQETNEKLAPKIKA 558
++ +K ++ A
Sbjct: 264 IESACQKQEKQLTA 277
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +1
Query: 433 TALREKLQAXVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQE 612
TA + K ++ Q+ ++ A+KV S QET+ + +DD +++ +I + +
Sbjct: 362 TAKKRKKRSKWIGRRQKVKRRARKVPSGCQETSSSIINGNDEEFDDENMHSETIITE-NQ 420
Query: 613 AANAKQ*ASILNSH 654
N + +SI+N +
Sbjct: 421 TINEETSSSIINGN 434
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 135 RRTIAALGQSDAGEENYELGGHDVLSR 55
R+ +AALG + G Y +GGHD R
Sbjct: 355 RKEVAALGVASFGNYIYAIGGHDNTGR 381
>SB_26484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +1
Query: 394 ELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDF 573
E R P + N+ R K+ A E + + ++V+ E+L P + +F
Sbjct: 181 EKRFGSPAIISNSLLERLKIAARFSENQPEKLQQFADLCADVESQVEQL-PSLACL--NF 237
Query: 574 AKNTQEVIKKIQEAANAK 627
AK Q VIKK+ ++ AK
Sbjct: 238 AKEMQPVIKKLPKSICAK 255
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 355 LEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNVQETN 531
L++ R +ERT LR + E + +RE ++ +N+V +K ++V +VQ TN
Sbjct: 393 LKKERLQMERTVATLRRQKTEFEAEISVIRE-VKIREENSVNVLRK--ERVDLDVQVTN 448
>SB_28865| Best HMM Match : DUF1565 (HMM E-Value=1.3)
Length = 367
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1
Query: 138 SRRTIAALGQSDAGEENYELGGHDVLSRD*VR 43
S RT + G + AG+E YEL DV SRD VR
Sbjct: 151 SDRTNQSCGAAPAGQEKYEL---DVSSRDVVR 179
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 343 AKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSNVQ 522
+KEAL+ + I+ E +V NAT+ K + V ++ ++ A + S N+Q
Sbjct: 377 SKEALQDREKQIQTLLEERDFERTEVA-NATSQVAKAEEEVSIIKRQHEQAAMEYSKNMQ 435
Query: 523 ETNE--KLAPKIKA 558
E +LA K KA
Sbjct: 436 ALKELIELAEKEKA 449
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/88 (23%), Positives = 37/88 (42%)
Frame = +1
Query: 328 DANGKAKEALEQSRQNIERTAXELRXAHPDVEKNATALREKLQAXVQNTVQESQKLAKKV 507
D K + +E+ +Q+ E VE+N +EK VQN + E ++A
Sbjct: 552 DKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEELRMAA-- 609
Query: 508 SSNVQETNEKLAPKIKAAYDDFAKNTQE 591
+E +++ K K D+ K +E
Sbjct: 610 ---AEERKKEIENKKKEIDDEMRKLEEE 634
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,653,339
Number of Sequences: 59808
Number of extensions: 211554
Number of successful extensions: 865
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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