Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_F03
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 133 1e-31
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 133 1e-31
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 55 5e-08
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 55 5e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 51 6e-07
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 50 1e-06
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 50 2e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 50 2e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 50 2e-06
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 49 3e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 49 3e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 48 6e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 48 8e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 48 8e-06
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 48 8e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 48 8e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 48 8e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 48 8e-06
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 48 8e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 48 8e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 46 2e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 46 2e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 46 2e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 46 2e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 46 2e-05
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 46 3e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 45 4e-05
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 45 4e-05
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 45 4e-05
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 44 7e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 7e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 44 1e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 43 2e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 42 4e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 42 4e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 42 4e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 42 4e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 41 9e-04
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 41 9e-04
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 41 9e-04
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 41 9e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 41 9e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 40 0.002
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 40 0.002
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 40 0.002
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 40 0.002
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 39 0.003
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 39 0.003
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 39 0.004
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 35 0.044
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 35 0.058
Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 33 0.18
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 33 0.18
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 32 0.41
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z68116-9|CAA92172.2| 101|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68116-4|CAA92171.2| 101|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68116-1|CAA92174.2| 101|Caenorhabditis elegans Hypothetical pr... 29 2.2
U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protea... 29 2.2
U41555-7|AAY55846.1| 101|Caenorhabditis elegans Nematode specif... 29 2.2
U41555-6|AAY55845.1| 101|Caenorhabditis elegans Nematode specif... 29 2.2
U41555-5|AAY55844.1| 101|Caenorhabditis elegans Nematode specif... 29 2.2
U41555-3|AAY55847.1| 101|Caenorhabditis elegans Nematode specif... 29 2.2
L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-lik... 29 2.2
L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-lik... 29 2.2
Z82262-2|CAB05152.1| 248|Caenorhabditis elegans Hypothetical pr... 29 2.9
U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z83103-8|CAE17765.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83103-7|CAE17764.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83103-6|CAD44104.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83103-5|CAC42279.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83103-4|CAB05471.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 28 5.0
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 28 5.0
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 28 5.0
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 28 5.0
Z68116-8|CAH60761.1| 101|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68116-5|CAD54144.1| 101|Caenorhabditis elegans Hypothetical pr... 28 6.7
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 28 6.7
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 28 6.7
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 28 6.7
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 28 6.7
Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 27 8.8
U67953-2|AAL13327.1| 340|Caenorhabditis elegans Hypothetical pr... 27 8.8
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 27 8.8
U41555-8|AAL65774.1| 101|Caenorhabditis elegans Nematode specif... 27 8.8
U41555-4|AAY55843.1| 101|Caenorhabditis elegans Nematode specif... 27 8.8
U41555-2|AAU05596.1| 101|Caenorhabditis elegans Nematode specif... 27 8.8
AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear recep... 27 8.8
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 133 bits (321), Expect = 1e-31
Identities = 56/86 (65%), Positives = 74/86 (86%)
Frame = +2
Query: 140 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 319
R P I+G+ SLK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S+GF FVRF+E
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 320 RRDAEEALDTMDGRMLDGRELRVQMA 397
RRDAE ALD DG+++DGRELRV +A
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 133 bits (321), Expect = 1e-31
Identities = 56/86 (65%), Positives = 74/86 (86%)
Frame = +2
Query: 140 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 319
R P I+G+ SLK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S+GF FVRF+E
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 320 RRDAEEALDTMDGRMLDGRELRVQMA 397
RRDAE ALD DG+++DGRELRV +A
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +2
Query: 155 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAE 334
+ G+ S+ V N ++TT E+L F G++ ++ I DR T RGFAF+ F E A+
Sbjct: 1 MSGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQ 60
Query: 335 EALDTMDGRMLDGRELRVQMA 397
A++ M+G +GR LRV +A
Sbjct: 61 RAVEQMNGAEFNGRPLRVNLA 81
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
S+ V N ++TT +DL F + G V ++ I DR T RGFAFV F E A+ A+D
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 350 MDGRMLDGRELRVQMA 397
+G +GR LRV +A
Sbjct: 65 FNGVDFNGRALRVNLA 80
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
S+ V N+ Y+ T E++ F G V ++ I DR T RGFAFV F E A+ A++
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 350 MDGRMLDGRELRVQMA 397
++G +GR LRV A
Sbjct: 67 LNGVAFNGRNLRVNYA 82
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +2
Query: 158 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 337
DG L V N+ +R DL+ +FE+ G V D+ I + R S+GF FV +DAE
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAER 207
Query: 338 ALDTMDGRMLDGRELRVQMA 397
A + G M++GR++ V A
Sbjct: 208 ARQELHGSMIEGRKIEVNCA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +2
Query: 158 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 337
DG L V N+ +R DL+ +FE+ G V D+ I + R S+GF FV +DAE
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAER 207
Query: 338 ALDTMDGRMLDGRELRVQMA 397
A + G M++GR++ V A
Sbjct: 208 ARQELHGSMIEGRKIEVNCA 227
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +2
Query: 137 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 316
G PP M SL + +L + L F G V I + RD +R S G+A+V F
Sbjct: 47 GYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
Query: 317 ERRDAEEALDTMDGRMLDGRELRV 388
+ DAE ALDTM+ ++ GR +R+
Sbjct: 107 QPADAERALDTMNFEVIHGRPMRI 130
Score = 34.7 bits (76), Expect = 0.058
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
V+L V N+ + LR F G + + D R S+GF FV F + +A A+
Sbjct: 343 VNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGR-SKGFGFVCFEKPEEATAAVT 401
Query: 347 TMDGRMLDGRELRVQMA 397
M+ +M+ + L V +A
Sbjct: 402 DMNSKMIGAKPLYVALA 418
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N E L +F + GE+ + D + +GF FV F ++ A +A++ ++
Sbjct: 242 VKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKP-KGFGFVAFADQDAAGQAVEKLND 300
Query: 359 RMLDGRELRVQM 394
+L+G + ++ +
Sbjct: 301 SILEGTDCKLSV 312
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +2
Query: 137 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 316
G PP M SL + +L + L F G V I + RD +R S G+A+V F
Sbjct: 47 GYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
Query: 317 ERRDAEEALDTMDGRMLDGRELRV 388
+ DAE ALDTM+ ++ GR +R+
Sbjct: 107 QPADAERALDTMNFEVIHGRPMRI 130
Score = 34.7 bits (76), Expect = 0.058
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
V+L V N+ + LR F G + + D R S+GF FV F + +A A+
Sbjct: 343 VNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGR-SKGFGFVCFEKPEEATAAVT 401
Query: 347 TMDGRMLDGRELRVQMA 397
M+ +M+ + L V +A
Sbjct: 402 DMNSKMIGAKPLYVALA 418
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N E L +F + GE+ + D + +GF FV F ++ A +A++ ++
Sbjct: 242 VKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKP-KGFGFVAFADQDAAGQAVEKLND 300
Query: 359 RMLDGRELRVQM 394
+L+G + ++ +
Sbjct: 301 SILEGTDCKLSV 312
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
S+ V N+ Y T E++ + F CG V + I DR++ +GFA+V F E+ + AL
Sbjct: 79 SVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNAL-A 137
Query: 350 MDGRMLDGRELRV 388
M +L GR+++V
Sbjct: 138 MTDSLLRGRQIKV 150
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
+L V NL+Y T + + +F R G+V + + DR+ + GF FV ++ R DAE AL
Sbjct: 38 TLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQN 97
Query: 350 MDGRMLDGRELR 385
+ +D R +R
Sbjct: 98 ISNTRMDDRVIR 109
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE A++ M+G
Sbjct: 26 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 85
Query: 359 RMLDGRELRVQMA 397
+ L R +R A
Sbjct: 86 QWLGRRTIRTNWA 98
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE A++ M+G
Sbjct: 36 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 95
Query: 359 RMLDGRELRVQMA 397
+ L R +R A
Sbjct: 96 QWLGRRTIRTNWA 108
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE A++ M+G
Sbjct: 139 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 198
Query: 359 RMLDGRELRVQMA 397
+ L R +R A
Sbjct: 199 QWLGRRTIRTNWA 211
Score = 36.3 bits (80), Expect = 0.019
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
+L V NL T + + +F + G V + D + +AFV F + A +AL T
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDG---SNDPYAFVEFSDHGQASQALQT 103
Query: 350 MDGRMLDGRELRVQMA 397
M+ R+L RE++V A
Sbjct: 104 MNKRLLLDREMKVNWA 119
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE A++ M+G
Sbjct: 107 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 166
Query: 359 RMLDGRELRVQMA 397
+ L R +R A
Sbjct: 167 QWLGRRTIRTNWA 179
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/86 (33%), Positives = 40/86 (46%)
Frame = +2
Query: 140 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 319
R P + V +L LR F + GEV + I RD T + +G+ FV +
Sbjct: 123 RSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPR 182
Query: 320 RRDAEEALDTMDGRMLDGRELRVQMA 397
R DAE A+D M+G L R +R A
Sbjct: 183 REDAERAIDEMNGAWLGRRTIRTNWA 208
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +2
Query: 209 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELR 385
+++RR F+R G + ++ T + +G+AFV+F + A A+ M+ + G+ +R
Sbjct: 269 DEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVR 321
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
+L V NL T E L +F + G V I + + +AFV F + A AL +
Sbjct: 41 TLFVANLDPAITDEFLATLFNQIGAVMKAKII---FEGLNDPYAFVEFSDHNQATLALQS 97
Query: 350 MDGRMLDGRELRVQMA 397
+GR L +E+ V A
Sbjct: 98 HNGRELLEKEMHVTWA 113
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/75 (40%), Positives = 40/75 (53%)
Frame = +2
Query: 173 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 352
L V NL+ TT +DLR VF GE+ + DR + SRGF F+ F DA A D +
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKL 137
Query: 353 DGRMLDGRELRVQMA 397
LDG ++RV +
Sbjct: 138 CNTDLDGHKIRVDFS 152
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/73 (32%), Positives = 44/73 (60%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
+ L+++TT E+LR F R GEV + + RD T+ +RGF F+ F + ++ L+ +
Sbjct: 49 IGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNRE- 107
Query: 359 RMLDGRELRVQMA 397
LDG+++ ++A
Sbjct: 108 HELDGKKIDPKVA 120
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ L+ +T ED+++ FE G+V D + D+ T+ RGF FV F D++E D
Sbjct: 138 IGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF----DSDEVAD 189
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/73 (32%), Positives = 44/73 (60%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
+ L+++TT E+LR F R GEV + + RD T+ +RGF F+ F + ++ L+ +
Sbjct: 49 IGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNRE- 107
Query: 359 RMLDGRELRVQMA 397
LDG+++ ++A
Sbjct: 108 HELDGKKIDPKVA 120
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ L+ +T ED+++ FE G+V D + D+ T+ RGF FV F D++E D
Sbjct: 138 IGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF----DSDEVAD 189
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +2
Query: 143 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFER 322
P + G L V NL +L+ +F G++ + Y+ +GFAF+R R
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 323 RDAEEALDTMDGRMLDGRELRVQMA 397
AE A + +DGR++ GR++RV+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +2
Query: 143 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFER 322
P + G L V NL +L+ +F G++ + Y+ +GFAF+R R
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 323 RDAEEALDTMDGRMLDGRELRVQMA 397
AE A + +DGR++ GR++RV+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 200 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 379
TT EDL +F R G++ + I RDR + +S +AF+ F + E+A MD ++D R
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 380 LRVQMA 397
+ V +
Sbjct: 312 IHVDFS 317
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 200 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 379
TT EDL +F R G++ + I RDR + +S +AF+ F + E+A MD ++D R
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 380 LRVQMA 397
+ V +
Sbjct: 312 IHVDFS 317
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 200 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 379
TT EDL +F R G++ + I RDR + +S +AF+ F + E+A MD ++D R
Sbjct: 183 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 242
Query: 380 LRVQMA 397
+ V +
Sbjct: 243 IHVDFS 248
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M SL V +L L F G V I + RD TR S G+A+V F + DAE A+
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 344 DTMDGRMLDGRELRV 388
DTM+ L G+ +R+
Sbjct: 91 DTMNFEALHGKPMRI 105
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
V+L V NL + L++ FE G + + D R S+GF FV F + +A A+
Sbjct: 317 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVT 375
Query: 347 TMDGRMLDGRELRV 388
M+ +M+ + L V
Sbjct: 376 EMNSKMVCSKPLYV 389
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N E L +VF + G + + +S+GF FV F +AE A+ +
Sbjct: 217 VKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 359 RMLDGRELRVQM 394
++G +L++ +
Sbjct: 275 STIEGTDLKLHV 286
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M SL V +L L F G V I + RD TR S G+A+V F + DAE A+
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 344 DTMDGRMLDGRELRV 388
DTM+ L G+ +R+
Sbjct: 91 DTMNFEALHGKPMRI 105
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
V+L V NL + L++ FE G + + D R S+GF FV F + +A A+
Sbjct: 257 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVT 315
Query: 347 TMDGRMLDGRELRVQMA 397
M+ +M+ + L V +A
Sbjct: 316 EMNSKMVCSKPLYVAIA 332
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N E L ++F + G + + +S+GF FV F +AE A+ +
Sbjct: 157 VKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 359 RMLDGRELRVQM 394
++G +L++ +
Sbjct: 215 STIEGTDLKLHV 226
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M SL V +L L F G V I + RD TR S G+A+V F + DAE A+
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 344 DTMDGRMLDGRELRV 388
DTM+ L G+ +R+
Sbjct: 91 DTMNFEALHGKPMRI 105
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
V+L V NL + L++ FE G + + D R S+GF FV F + +A A+
Sbjct: 317 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVT 375
Query: 347 TMDGRMLDGRELRVQMA 397
M+ +M+ + L V +A
Sbjct: 376 EMNSKMVCSKPLYVAIA 392
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N E L ++F + G + + +S+GF FV F +AE A+ +
Sbjct: 217 VKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 359 RMLDGRELRVQM 394
++G +L++ +
Sbjct: 275 STIEGTDLKLHV 286
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/73 (28%), Positives = 43/73 (58%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
S+ + N+ + +T E++ F+ CG++ IP+D++T++ + FA++ F + E AL
Sbjct: 56 SVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-V 114
Query: 350 MDGRMLDGRELRV 388
M+G + R + V
Sbjct: 115 MNGSLFRSRPIVV 127
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V L Y T+ + L FE+ G++ + + DR T++SRG+ FV +R AE A
Sbjct: 39 VGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD-PN 97
Query: 359 RMLDGRELRVQMA 397
++DGR+ V +A
Sbjct: 98 PIIDGRKANVNLA 110
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +2
Query: 185 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRM 364
NL Y T +DL+ +F++ GEV ++ + D+ T +GFA V F A A +DG +
Sbjct: 285 NLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYV 344
Query: 365 LDGRELRV 388
GR + +
Sbjct: 345 FKGRMMHI 352
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 173 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES--RGFAFVRFFERRDAEEALD 346
L V NL T + LR+ FE+ G++ D + +YT+E RGFAFV F + A AL
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASL---KYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 347 TMDGRMLDGRELRVQ 391
+ + ++L V+
Sbjct: 62 KSNQTFFNSKKLTVE 76
Score = 40.7 bits (91), Expect = 9e-04
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +2
Query: 125 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVF-ERCGE-VGDIYIPRDRYTRE---- 286
K S + I+ +L V NL + TT L +F +R G+ V I + E
Sbjct: 627 KSSKKQSEKEIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKP 686
Query: 287 -SRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 397
S GF FV+F+ DA+ AL M G +LDG L ++++
Sbjct: 687 LSMGFGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 173 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIP-RDRYTRESRGFAFVRFFERRDAEEALDT 349
L V NL + + +++ +FE G V I IP + ++ RGF FV F +A A D+
Sbjct: 750 LLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRAFDS 809
Query: 350 M-DGRMLDGRELRVQMA 397
+ L GR L ++ A
Sbjct: 810 LVHSTHLYGRRLVLEWA 826
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/73 (32%), Positives = 43/73 (58%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V +L+ + E L+ F + GEV + + RD T++S+G+ FV F +++AE A+ M+G
Sbjct: 139 VGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNG 198
Query: 359 RMLDGRELRVQMA 397
+ + R +R A
Sbjct: 199 KWIGKRAVRTNWA 211
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/72 (29%), Positives = 44/72 (61%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
S+ V N++ +TT DLR +F G++ ++ I + ++ +AFVR+ ++ A +A+
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFK------TQRYAFVRYEKKECATKAIME 291
Query: 350 MDGRMLDGRELR 385
M+G+ + G ++R
Sbjct: 292 MNGKEMAGNQVR 303
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/75 (30%), Positives = 42/75 (56%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
S+ V N+ +++T ++ F CG+V + IP+D++T + FAFV F + + AL
Sbjct: 47 SVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-V 105
Query: 350 MDGRMLDGRELRVQM 394
+ G M R++ V +
Sbjct: 106 LSGTMFRNRKIMVTL 120
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 347 TMDG-RMLDGRELRVQM 394
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 391
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 392 M 394
+
Sbjct: 574 L 574
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 347 TMDG-RMLDGRELRVQM 394
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 391
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 392 M 394
+
Sbjct: 574 L 574
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/73 (28%), Positives = 42/73 (57%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
S+ + N+ + +T E++ F+ CG + IP+D++T++ + FA++ F + E AL
Sbjct: 62 SVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-V 120
Query: 350 MDGRMLDGRELRV 388
M+G + R + V
Sbjct: 121 MNGSLFRSRPIVV 133
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 347 TMDG-RMLDGRELRVQM 394
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 391
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 443 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 502
Query: 392 M 394
+
Sbjct: 503 L 503
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 347 TMDG-RMLDGRELRVQM 394
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 347 TMDG-RMLDGRELRVQM 394
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 347 TMDG-RMLDGRELRVQM 394
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 347 TMDG-RMLDGRELRVQM 394
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 391
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 392 M 394
+
Sbjct: 574 L 574
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
+ L+Y + D+ VF + GEV +I + RD+ T +S+GFAF+ + ++R A+D +G
Sbjct: 42 IGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNG 101
Query: 359 RMLDGRELRV 388
L R +RV
Sbjct: 102 ISLHKRMIRV 111
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +2
Query: 158 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 337
+ +L ++ L T E++R +F GE+ + RD+ T +S G+ FV + DA
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 338 ALDTMDGRMLDGRELRVQMA 397
A+ + +G L + ++V A
Sbjct: 99 AVSSFNGLRLQNKTIKVSYA 118
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 125 KMSYGRPP-PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 301
K+SY RP +I G +L V + T +L +F G++ I D T S+G
Sbjct: 114 KVSYARPSNDQIKGS-NLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVG 172
Query: 302 FVRFFERRDAEEALDTMDGRMLDG 373
FVRF ++ +A+ A+ T++G + G
Sbjct: 173 FVRFDKKDEADVAIKTLNGSIPSG 196
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = +2
Query: 158 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 337
DG L V N+ ++ DL +FE+ G V D+ I + R S+GF FV DA+
Sbjct: 97 DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADR 154
Query: 338 ALDTMDGRMLDGRELRVQMA 397
A +G ++GR + V +A
Sbjct: 155 ARAEFNGTTIEGRRVEVNLA 174
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL----D 346
V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + A+
Sbjct: 27 VGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPH 86
Query: 347 TMDGRMLD 370
+DG+ +D
Sbjct: 87 IIDGKTVD 94
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = +2
Query: 158 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 337
DG L V N+ ++ DL +FE+ G V D+ I + R S+GF FV DA+
Sbjct: 97 DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADR 154
Query: 338 ALDTMDGRMLDGRELRVQMA 397
A +G ++GR + V +A
Sbjct: 155 ARAEFNGTTIEGRRVEVNLA 174
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL----D 346
V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + A+
Sbjct: 27 VGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPH 86
Query: 347 TMDGRMLD 370
+DG+ +D
Sbjct: 87 IIDGKTVD 94
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL----D 346
V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + A+
Sbjct: 27 VGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPH 86
Query: 347 TMDGRMLD 370
+DG+ +D
Sbjct: 87 IIDGKTVD 94
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE-SRGFAFVRFFERRDAEEALDTMD 355
+ NL+ L +F G + ++ +P DR+ RG+ +V + DAE+++ MD
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 356 GRMLDGRELRVQM 394
G +DG + V+M
Sbjct: 197 GGQIDGMAVHVEM 209
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +2
Query: 176 KVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD 355
+V NL ++LR +F + G V I+I RD+ T +GFAFV F R DA A+ ++
Sbjct: 179 RVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
Query: 356 GRMLDGRELRVQ 391
+ L+V+
Sbjct: 239 DIRMYHMVLKVE 250
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V L T ++L +F+R G + +++ R GFAFV + + RDAE+A+ +DG
Sbjct: 7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 359 RMLDGRELRVQMA 397
+ G RV+++
Sbjct: 62 SRICGVRARVELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V L T ++L +F+R G + +++ R GFAFV + + RDAE+A+ +DG
Sbjct: 7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 359 RMLDGRELRVQMA 397
+ G RV+++
Sbjct: 62 SRICGVRARVELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V L T ++L +F+R G + +++ R GFAFV + + RDAE+A+ +DG
Sbjct: 7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 359 RMLDGRELRVQMA 397
+ G RV+++
Sbjct: 62 SRICGVRARVELS 74
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/84 (27%), Positives = 45/84 (53%)
Frame = +2
Query: 137 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 316
G P ++G + V N+ T +D+ F G++ +I++ DR T +G+A V +
Sbjct: 46 GAPQRSVEGWIVF-VTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYE 104
Query: 317 ERRDAEEALDTMDGRMLDGRELRV 388
+++A EA+D + L G+ ++V
Sbjct: 105 TQKEANEAIDQSNDTDLLGQNVKV 128
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 7e-05
Identities = 28/76 (36%), Positives = 37/76 (48%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
+L V T T + L F G+V I IP D + + RGF FV F DA A+D
Sbjct: 12 TLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 350 MDGRMLDGRELRVQMA 397
M+ L G+ +RV A
Sbjct: 72 MNESELFGKTIRVNFA 87
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Frame = +2
Query: 134 YGRPPPRIDGMVS--------LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 289
+G PPP +G + + V ++ + L +FE+ G++ D+ + D + S
Sbjct: 181 FGGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGAS 240
Query: 290 RGFAFVRFFERRDAEEALDTMDGRMLD-GRELRVQMA 397
RG+AFV + + DA A T DG + G+ L+V ++
Sbjct: 241 RGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVS 277
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 230 ERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 397
E+ E+ Y DR ++ + +AF+ F ER D +A++ +G+ L+G + +A
Sbjct: 391 EKLNELFKEYASLDR-VKKVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASLA 445
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
+L V + Y T+ LRR FE G++ + + D + RG+AF+ + ++ + A
Sbjct: 105 TLFVGRINYETSESKLRREFEAYGKIKKLTMVHDE-AGKPRGYAFIEYSDKAEMHTAYKK 163
Query: 350 MDGRMLDGRELRV 388
DG +DG+ L V
Sbjct: 164 ADGIKVDGKRLVV 176
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 173 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
L + L++ TT E L F + G V D + RD T+ SRGF FV F AE A++
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 173 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
L + L++ TT E L F + G V D + RD T+ SRGF FV F AE A++
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 173 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
L + L++ TT E L F + G V D + RD T+ SRGF FV F AE A++
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 173 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES-RGFAFVRFFERRDAEEALDT 349
L + NL ++T EDL+ + G+ +I +P R ++ GF F++F E+ DAE+ +
Sbjct: 97 LIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGREF 156
Query: 350 MDGRMLDGRELRVQMA 397
+ + GR + A
Sbjct: 157 FNTNKVLGRSVAADWA 172
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 185 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM-DGR 361
NL+Y T E ++ + G++ I + + + S+G AFV F +A ++ + DG
Sbjct: 269 NLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGVEDGV 328
Query: 362 MLDGRELRVQMA 397
++D R ++ +A
Sbjct: 329 IIDNRLVKANLA 340
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V NL +++ +F + G + + I R FAFV F + RDAE+A+ DG
Sbjct: 13 VGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR----GPAFAFVEFEDHRDAEDAVRARDG 68
Query: 359 RMLDGRELRVQ 391
DGR +RV+
Sbjct: 69 YEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V NL +++ +F + G + + I R FAFV F + RDAE+A+ DG
Sbjct: 13 VGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR----GPAFAFVEFEDHRDAEDAVRARDG 68
Query: 359 RMLDGRELRVQ 391
DGR +RV+
Sbjct: 69 YEFDGRRIRVE 79
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 209 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEA 340
+DLR FE+ G+V DI P D+ T+ R FAF+ F E A++A
Sbjct: 124 QDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V ++ EDL F + GEV + DR SRGFAFV F + AL +
Sbjct: 33 VGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAARE- 91
Query: 359 RMLDGRELRVQMA 397
+ + G+ + V+ A
Sbjct: 92 QTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 209 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEA 340
+DLR FE+ G+V DI P D+ T+ R FAF+ F E A++A
Sbjct: 124 QDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V ++ EDL F + GEV + DR SRGFAFV F + AL +
Sbjct: 33 VGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAARE- 91
Query: 359 RMLDGRELRVQMA 397
+ + G+ + V+ A
Sbjct: 92 QTIKGKSVEVKPA 104
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M + V ++++ + LRR F+ G + I + D T + FAFV + A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 344 DTMDGRMLDGRELRV 388
++M+G+ML GR L+V
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELR 385
DL+ VFE GE+ + R R RGF ++ F EA+ M+ L G+ LR
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M + V ++++ + LRR F+ G + I + D T + FAFV + A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 344 DTMDGRMLDGRELRV 388
++M+G+ML GR L+V
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 388
DL+ VFE GE+ + R R RGF ++ F EA+ M+ L G+ LRV
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M + V ++++ + LRR F+ G + I + D T + FAFV + A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 344 DTMDGRMLDGRELRV 388
++M+G+ML GR L+V
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 388
DL+ VFE GE+ + R R RGF ++ F EA+ M+ L G+ LRV
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRV 280
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +2
Query: 146 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERR 325
PP ++ ++ +K NL Y+ T E++ +F + G V I + T E+RG AFV + +
Sbjct: 14 PPEVNRILYIK--NLPYKITTEEMYEIFGKFGAVRQIRVGN---TAETRGTAFVVYEDIF 68
Query: 326 DAEEALDTMDGRMLDGRELRV 388
DA+ A + + G + R L V
Sbjct: 69 DAKTACEHLSGYNVSNRYLVV 89
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
+ LT R + +D+ F G++ D+ + GF FV F ++RDAE+A+ ++G
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNG 58
Query: 359 RMLDGREL 382
+ L G +
Sbjct: 59 KELGGERV 66
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
+ LT R + +D+ F G++ D+ + GF FV F ++RDAE+A+ ++G
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNG 58
Query: 359 RMLDGREL 382
+ L G +
Sbjct: 59 KELGGERV 66
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
+ LT R + +D+ F G++ D+ + GF FV F ++RDAE+A+ ++G
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNG 58
Query: 359 RMLDGREL 382
+ L G +
Sbjct: 59 KELGGERV 66
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
++ V L + + L + + G V + +P+DR T +GF FV F DA+ A+
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 350 MDGRMLDGRELRVQMA 397
++ L G+ ++V A
Sbjct: 74 LNMIKLYGKPIKVNKA 89
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 155 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDI-YIPRDRYTRESRGFAFVRFFERRDA 331
+D ++ V NL + L F G + + I RD + S+GFAF+ F +
Sbjct: 96 MDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEAS 155
Query: 332 EEALDTMDGRMLDGRELRVQMA 397
+ AL+ M+G+ L R + V A
Sbjct: 156 DTALEAMNGQFLCNRAITVSYA 177
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 40.7 bits (91), Expect = 9e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M L + + Y D+ R + G++ +I + +Y GFAFV F + RDAE+A
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDAC 52
Query: 344 DTMDGRMLDGRELR--VQMA 397
+DG+ ++G +R V+MA
Sbjct: 53 HDLDGKTMEGSSMRLVVEMA 72
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 40.7 bits (91), Expect = 9e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M L + + Y D+ R + G++ +I + +Y GFAFV F + RDAE+A
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDAC 52
Query: 344 DTMDGRMLDGRELR--VQMA 397
+DG+ ++G +R V+MA
Sbjct: 53 HDLDGKTMEGSSMRLVVEMA 72
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 40.7 bits (91), Expect = 9e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
M L + + Y D+ R + G++ +I + +Y GFAFV F + RDAE+A
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDAC 52
Query: 344 DTMDGRMLDGRELR--VQMA 397
+DG+ ++G +R V+MA
Sbjct: 53 HDLDGKTMEGSSMRLVVEMA 72
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
++ V L + + L + + G V + +P+DR T +GF FV F DA+ A+
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 350 MDGRMLDGRELRVQMA 397
++ L G+ ++V A
Sbjct: 84 LNMIKLYGKPIKVNKA 99
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 155 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDI-YIPRDRYTRESRGFAFVRFFERRDA 331
+D ++ V NL + L F G + + I RD + S+GFAF+ F +
Sbjct: 106 MDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEAS 165
Query: 332 EEALDTMDGRMLDGRELRVQMA 397
+ AL+ M+G+ L R + V A
Sbjct: 166 DTALEAMNGQFLCNRAITVSYA 187
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
+L + + T P DL F G V D+ I D T S+G +V F++ L
Sbjct: 26 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-A 84
Query: 350 MDGRMLDGRELRVQ 391
++G+ L G L++Q
Sbjct: 85 LNGQRLMGAPLQIQ 98
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +2
Query: 149 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRD 328
P G + V+NL + + +R +FE G + I + D RE+RGFA + F D
Sbjct: 121 PGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADD 179
Query: 329 AEEALDTMDGRMLDGRELRVQM 394
A+++ + ++ L GR +R+ +
Sbjct: 180 AQKSCEQLNNFELAGRCIRLSI 201
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +2
Query: 170 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 349
+L + + T P DL F G V D+ I D T S+G +V F++ L
Sbjct: 171 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-A 229
Query: 350 MDGRMLDGRELRVQ 391
++G+ L G L++Q
Sbjct: 230 LNGQRLMGAPLQIQ 243
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +2
Query: 149 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRD 328
P G + V+NL + + +R +FE G + I + D RE+RGFA + F D
Sbjct: 266 PGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADD 324
Query: 329 AEEALDTMDGRMLDGRELRVQM 394
A+++ + ++ L GR +R+ +
Sbjct: 325 AQKSCEQLNNFELAGRCIRLSI 346
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 215 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL----DTMDGRMLD 370
+R + + GE+ DI + RD T+ SRGF FV F + + + A+ +DG+ +D
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVD 56
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 215 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL----DTMDGRMLD 370
+R + + GE+ DI + RD T+ SRGF FV F + + + A+ +DG+ +D
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVD 56
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 146 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERR 325
P + + L V + +DLR +FE+ G++ + I +D+YT +G AF+ + R
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 326 DAEEALDTM-DGRMLDGRELRVQM 394
A T+ D + L G +Q+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQV 105
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 391
+L ++F G + + DR T +S+ F FV + ++ A+ M+G + + L+VQ
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQ 503
Query: 392 M 394
+
Sbjct: 504 L 504
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 143 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFER 322
P ++D L + L+ + + +++R +F GE+ ++ + R S+G AFV++
Sbjct: 117 PKDKMDDK-KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGA-DGASKGCAFVKYKHG 174
Query: 323 RDAEEALDTMDG 358
DA A+ + G
Sbjct: 175 LDAHMAISALHG 186
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 146 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERR 325
P + + L V + +DLR +FE+ G++ + I +D+YT +G AF+ + R
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 326 DAEEALDTM-DGRMLDGRELRVQM 394
A T+ D + L G +Q+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQV 105
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 391
+L ++F G + + DR T +S+ F FV + ++ A+ M+G + + L+VQ
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQ 503
Query: 392 M 394
+
Sbjct: 504 L 504
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 143 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFER 322
P ++D L + L+ + + +++R +F GE+ ++ + R S+G AFV++
Sbjct: 117 PKDKMDDK-KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGA-DGASKGCAFVKYKHG 174
Query: 323 RDAEEALDTMDG 358
DA A+ + G
Sbjct: 175 LDAHMAISALHG 186
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 346
V+L V NL + L++ FE G + + D R S+GF FV F + +A A+
Sbjct: 254 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVT 312
Query: 347 TMDGRMLDGRELRVQMA 397
M+ +M+ + L V +A
Sbjct: 313 EMNSKMVCSKPLYVAIA 329
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N E L ++F + G + + +S+GF FV F +AE A+ +
Sbjct: 154 VKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHD 211
Query: 359 RMLDGRELRVQM 394
++G +L++ +
Sbjct: 212 STIEGTDLKLHV 223
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 167 VSLKVDNLTYRTTPEDLRRVFE-RCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
+++ V NL + T + L F + G V + I RD+ T + +GFAFV F + AL
Sbjct: 246 MAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
Query: 344 DTMDGRMLDGRELRV 388
+M+ ++ R+LR+
Sbjct: 306 -SMETIKMEKRDLRI 319
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +2
Query: 164 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 343
MV + + L R + D+ F G++ D+ + GF FV F ++RDA++A+
Sbjct: 1 MVRVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV 52
Query: 344 DTMDGRMLDGREL 382
++G+ L G +
Sbjct: 53 HDLNGKELCGERV 65
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +2
Query: 224 VFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 397
+FE+ G V D+ I + R S+GF FV DA+ A +G ++GR + V +A
Sbjct: 1 MFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +2
Query: 185 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRM 364
+L + E L + F + + R+ T +S+G+ FV F + D A+ MDG+
Sbjct: 209 DLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKY 268
Query: 365 LDGRELRVQ 391
+ R ++++
Sbjct: 269 VGNRPIKLR 277
>Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical
protein F58B3.7 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 209 EDLRRVFERCGEVGDIYIPRDRYTRESRGF-AFVRFFERRDAEEALDTMDGRMLDGREL 382
++++ E+CG+V ++ + D E R FV F A +A M+GR GR +
Sbjct: 298 DEIKEEMEKCGQVVNVIVHVDESQEEDRQVRVFVEFTNNAQAIKAFVMMNGRFFGGRSV 356
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N+ ++ T ++L+ +F + G V + + + +G AFV F A++ + + D
Sbjct: 687 VRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDK 745
Query: 359 RMLDGRELRVQMA 397
ML REL V ++
Sbjct: 746 LMLRERELEVALS 758
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 158 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVG-DIYI--PRDRYTRES----RGFAFVRFF 316
D + ++ V NL T E+ ++ +CG + DI P+ + RE +G +
Sbjct: 176 DKVHAVYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYI 235
Query: 317 ERRDAEEALDTMDGRMLDGRELRVQMA 397
++ E A + +DG L+GRE++V+ A
Sbjct: 236 KKESVELACNILDGANLNGREVKVEEA 262
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 212 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 391
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 350 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 409
Query: 392 M 394
+
Sbjct: 410 L 410
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVG------DIYIPRDRYTRESRGFAFVRFFERRDAEEA 340
+ L Y + D+ + + C DI++ DR + +GFA+V F + A
Sbjct: 10 IGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTA 69
Query: 341 LDTMDGRMLDGRELRVQMA 397
+ ++G R L+V A
Sbjct: 70 ISGLNGADFGNRVLKVNRA 88
>Z68116-9|CAA92172.2| 101|Caenorhabditis elegans Hypothetical
protein F42F12.6 protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + Q+ C N C ++CA+ YDG T
Sbjct: 41 PWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>Z68116-4|CAA92171.2| 101|Caenorhabditis elegans Hypothetical
protein F42F12.7 protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + Q+ C N C ++CA+ YDG T
Sbjct: 41 PWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>Z68116-1|CAA92174.2| 101|Caenorhabditis elegans Hypothetical
protein F42F12.1 protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + Q+ C N C ++CA+ YDG T
Sbjct: 41 PWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protease
related protein 4 protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 575 SENDCVSGNVPWNSLSQSES--DCANGCGYDCASNY 474
S+ C++ N N+L +E C + CGY C Y
Sbjct: 119 SDRFCIASNGAVNTLLSAEDVLSCCSNCGYGCEGGY 154
>U41555-7|AAY55846.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 6 protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + Q+ C N C ++CA+ YDG T
Sbjct: 41 PWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-6|AAY55845.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 5 protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + Q+ C N C ++CA+ YDG T
Sbjct: 41 PWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-5|AAY55844.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 4 protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + Q+ C N C ++CA+ YDG T
Sbjct: 41 PWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-3|AAY55847.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 2 protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + Q+ C N C ++CA+ YDG T
Sbjct: 41 PWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 575 SENDCVSGNVPWNSLSQSES--DCANGCGYDCASNY 474
S+ C++ N N+L +E C + CGY C Y
Sbjct: 119 SDRFCIASNGAVNTLLSAEDVLSCCSNCGYGCEGGY 154
>L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 575 SENDCVSGNVPWNSLSQSES--DCANGCGYDCASNY 474
S+ C++ N N+L +E C + CGY C Y
Sbjct: 119 SDRFCIASNGAVNTLLSAEDVLSCCSNCGYGCEGGY 154
>Z82262-2|CAB05152.1| 248|Caenorhabditis elegans Hypothetical
protein C43F9.5 protein.
Length = 248
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -1
Query: 512 CANGC--GYDCASNYDGGNETWTCACDR 435
C+NGC GY C SN G TCA R
Sbjct: 197 CSNGCPTGYSCNSNTGNGYCCATCASGR 224
>U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical
protein K06A1.6 protein.
Length = 937
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 572 ENDCVSGNVPWNSLSQSESDCANGCGYDCASNY 474
EN VS W+S S SESD + G D +N+
Sbjct: 114 ENVSVSSESSWSSASDSESDEDSATGRDSTNNH 146
>Z83103-8|CAE17765.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.9 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 545 PWNSLSQSESD-CANGCGYDCASNYDGGNETWTCACDRNDSC 423
PW S + +++ C N C ++CA+ YDG +C DR C
Sbjct: 42 PWLSYATAKNKTCYNLCVHNCAAVYDG-----SCINDRRFKC 78
>Z83103-7|CAE17764.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.8 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 545 PWNSLSQSESD-CANGCGYDCASNYDGGNETWTCACDRNDSC 423
PW S + +++ C N C ++CA+ YDG +C DR C
Sbjct: 42 PWLSYATAKNKTCYNLCVHNCAAVYDG-----SCINDRRFKC 78
>Z83103-6|CAD44104.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.7 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 545 PWNSLSQSESD-CANGCGYDCASNYDGGNETWTCACDRNDSC 423
PW S + +++ C N C ++CA+ YDG +C DR C
Sbjct: 42 PWLSYATAKNKTCYNLCVHNCAAVYDG-----SCINDRRFKC 78
>Z83103-5|CAC42279.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.6 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 545 PWNSLSQSESD-CANGCGYDCASNYDGGNETWTCACDRNDSC 423
PW S + +++ C N C ++CA+ YDG +C DR C
Sbjct: 42 PWLSYATAKNKTCYNLCVHNCAAVYDG-----SCINDRRFKC 78
>Z83103-4|CAB05471.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.4 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 545 PWNSLSQSESD-CANGCGYDCASNYDGGNETWTCACDRNDSC 423
PW S + +++ C N C ++CA+ YDG +C DR C
Sbjct: 42 PWLSYATAKNKTCYNLCVHNCAAVYDG-----SCINDRRFKC 78
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = -1
Query: 512 CANGCGYDCASNYDGGNETWTCACD---RNDSCMAMRGDHIA-PSEREVPCRPTFVRPSC 345
C NG DC + DG +TC CD ++C M I P C P F +C
Sbjct: 445 CVNG---DCQTTVDGITTNYTCTCDSGWTGENCDTMIDYCIPNPCSYNSTCSPYFKGFNC 501
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = -1
Query: 512 CANGCGYDCASNYDGGNETWTCACD---RNDSCMAMRGDHIA-PSEREVPCRPTFVRPSC 345
C NG CAS DG +TC CD +C M I P C+P F C
Sbjct: 383 CNNG---KCASTIDGITTNYTCTCDDGWTGTNCDTMIDFCIPNPCSYNSTCKPKFKGYDC 439
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N+ + +DL +F G V + I + R S+GF FV E+A +
Sbjct: 55 VSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIESCEKARAALHE 112
Query: 359 RMLDGRELRVQMA 397
+ GR + V+ A
Sbjct: 113 SHVQGRIIEVRRA 125
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +2
Query: 179 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 358
V N+ + +DL +F G V + I + R S+GF FV E+A +
Sbjct: 55 VSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIESCEKARAALHE 112
Query: 359 RMLDGRELRVQMA 397
+ GR + V+ A
Sbjct: 113 SHVQGRIIEVRRA 125
>Z68116-8|CAH60761.1| 101|Caenorhabditis elegans Hypothetical
protein F42F12.10 protein.
Length = 101
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 545 PWNSLSQSESD-CANGCGYDCASNYDGGNETWTCACDRNDSC 423
PW S + + C N C ++CA+ YDG +C D++ C
Sbjct: 41 PWISFATHRNKTCYNLCVHNCAAVYDG-----SCTTDKDFRC 77
>Z68116-5|CAD54144.1| 101|Caenorhabditis elegans Hypothetical
protein F42F12.8 protein.
Length = 101
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 545 PWNSLSQSESD-CANGCGYDCASNYDGGNETWTCACDRNDSC 423
PW S + + C N C ++CA+ YDG +C D++ C
Sbjct: 41 PWISFATHRNKTCYNLCVHNCAAVYDG-----SCTTDKDFRC 77
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 287 SRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 397
S+G+AF + + ++A+ ++G L ++L VQ+A
Sbjct: 330 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA 366
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 287 SRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 397
S+G+AF + + ++A+ ++G L ++L VQ+A
Sbjct: 330 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 287 SRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 397
S+G+AF + + ++A+ ++G L ++L VQ+A
Sbjct: 305 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 287 SRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 397
S+G+AF + + ++A+ ++G L ++L VQ+A
Sbjct: 308 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA 344
>Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical
protein T23H4.2 protein.
Length = 373
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 269 DRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGR 376
D+ E+ +AF+R +RR ++AL+ M+ +D R
Sbjct: 265 DQSPVENARYAFLRSLQRRCTDKALENMEDESMDCR 300
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 200 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 379
T L F+R G + + + D T RGFA + F + A +A++ ++DG
Sbjct: 36 TGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRP-HVIDGDR 94
Query: 380 LRVQ 391
+ V+
Sbjct: 95 VDVE 98
>U67953-2|AAL13327.1| 340|Caenorhabditis elegans Hypothetical
protein ZC13.1a protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 391 LNAKFPAVQHSSVHRVQGFFSVTTLEKPHEGESSTFP 281
L+A FP + S +Q FF + E ++ S++FP
Sbjct: 22 LSAHFPQIPSSMHDGIQSFFGGSNTEYQNQSTSASFP 58
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 391 LNAKFPAVQHSSVHRVQGFFSVTTLEKPHEGESSTFP 281
L+A FP + S +Q FF + E ++ S++FP
Sbjct: 22 LSAHFPQIPSSMHDGIQSFFGGSNTEYQNQSTSASFP 58
>U41555-8|AAL65774.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 7 protein.
Length = 101
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + + C N C ++CA+ YDG T
Sbjct: 41 PWISFATHTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-4|AAY55843.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 3 protein.
Length = 101
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + + C N C ++CA+ YDG T
Sbjct: 41 PWISFATHTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-2|AAU05596.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 1 protein.
Length = 101
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 545 PWNSLS-QSESDCANGCGYDCASNYDGGNET 456
PW S + + C N C ++CA+ YDG T
Sbjct: 41 PWISFATHTNKTCYNLCVHNCAAVYDGSCTT 71
>AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear receptor
NHR-69 protein.
Length = 373
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 269 DRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGR 376
D+ E+ +AF+R +RR ++AL+ M+ +D R
Sbjct: 265 DQSPVENARYAFLRSLQRRCTDKALENMEDESMDCR 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,667,083
Number of Sequences: 27780
Number of extensions: 229362
Number of successful extensions: 886
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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