Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_F01
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.10 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.9  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
 Frame = -1

Query: 321 HIKTVKFNIF*MQRSVNE-NSVFNTTIVFLGHNIFILKSQAL----VFLTNIHFK----F 169
           +++TVKFN+F + ++V   N +F  TI+     +F    + L    +F+T    K    F
Sbjct: 189 NVETVKFNLFLLSQAVETFNDIFGWTIL---QTVFFTVPRVLMYFDIFITEHESKPNWLF 245

Query: 168 RIKNYVKSLIIVYFQKIYSTS 106
            + N++ +L+   F +I + +
Sbjct: 246 FLANFLTNLLFWEFDQIVNVA 266


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 256 EHRIFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYPREILEFEY 435
           + ++F+N +L +ENV+       Y      S  Y   G +L  + +V    P +IL F++
Sbjct: 556 KQKVFINGTLIIENVERASDQATYDCVAKNSQGYSARG-SLEVQVMV----PPQILPFDF 610


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 37  EDCKNFIPYICKRYS 81
           EDC N++P+I   +S
Sbjct: 327 EDCLNYVPHISTGFS 341


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 266 ILCSTRR*YFLDIIFLS*RVRHSFSLQTSILN 171
           I+C   R     ++  + ++RH F L+T +LN
Sbjct: 255 IMCDCVRSEASKVVKNAQKLRHKFDLKTLVLN 286


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/55 (21%), Positives = 20/55 (36%)
 Frame = -1

Query: 264 SVFNTTIVFLGHNIFILKSQALVFLTNIHFKFRIKNYVKSLIIVYFQKIYSTSEH 100
           +VFN    +L   + ++     V L     K  +KN+          KI +   H
Sbjct: 174 TVFNVAQCYLTTELVLMLQTRFVILNKQLTKITVKNFATKTQSAVLGKICTLHHH 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,968
Number of Sequences: 336
Number of extensions: 3590
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)