Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_E21
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.4  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   8.4  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 15/67 (22%), Positives = 29/67 (43%)
 Frame = -2

Query: 631 SVVFAHAARIHLKSLQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 452
           S V  H+ R   +    ++S   ++  G   + R+     + D     K+ +  S RH D
Sbjct: 576 SFVVEHSRRDRDRDRDRMRSDSGKVGGGGGGYDRDDYRRTEKDYRGNGKHDKYGSSRHSD 635

Query: 451 KAARHEN 431
            ++RH +
Sbjct: 636 SSSRHRS 642


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 531 LTNHGAPTAILQKRD*IICKDFKC 602
           +T+H + T  ++ ++ + CK FKC
Sbjct: 166 MTDHESATMEIRLKEPVDCKCFKC 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,850
Number of Sequences: 2352
Number of extensions: 10779
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)