Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_E10
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.4  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   4.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 273  GERAKLTCSPDYAYGQQGHPGVIPPNST 356
            GER  L  S DY Y  +G  G    +ST
Sbjct: 1579 GERVMLKASEDYRYSVRGLCGNFDHDST 1606


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 210 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 302
           FRI   E  R W     K+ + +  KL C P
Sbjct: 249 FRIQVDECDRLWILDSGKVDIAKGGKLACPP 279


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = -1

Query: 397 CIYSRRRSSTSKISVELGGMTPGWPC*P*A*SGEQVNLARSPTDIFATPSSQPRITSDFP 218
           C   R+  S S   +E G   P  P           + + +PT + ++P S+ +   D P
Sbjct: 568 CPRFRKLDSPSDSGIESGTEKPDKPA--------SSSASSAPTSVCSSPRSEDKEVEDMP 619

Query: 217 IL 212
           +L
Sbjct: 620 VL 621


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 46  EKYIVNNGCYLLKLSVQETSRPTPN 120
           ++Y+ N+   LLK  +  T+ PTPN
Sbjct: 807 DRYLPNSLRILLKRFLDITTPPTPN 831


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 16  ESEDLYLEKIEKYIVNNGCYL 78
           + ED+    I+KY+ N  C++
Sbjct: 59  QEEDISEGNIKKYLTNYSCFI 79


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 129 TVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 218
           T    +  T+ NG   +  R+  KPF  +I
Sbjct: 461 TYFEQFDTTINNGLLLEEQRNDDKPFLIKI 490


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 129 TVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 218
           T    +  T+ NG   +  R+  KPF  +I
Sbjct: 461 TYFEQFDTTINNGLLLEEQRNDDKPFLIKI 490


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,993
Number of Sequences: 438
Number of extensions: 4200
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)