Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_D22
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   0.85 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   0.85 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   6.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   6.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 379 RLRVGKKYHQCCKCASLFINK*I*NSDLK 465
           R   G K  QC KC    +NK + NS +K
Sbjct: 251 RNHAGSKPFQCNKCDYTCVNKSMLNSHMK 279


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 379 RLRVGKKYHQCCKCASLFINK*I*NSDLK 465
           R   G K  QC KC    +NK + NS +K
Sbjct: 9   RNHAGSKPFQCNKCDYTCVNKSMLNSHMK 37


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 265 KFMNGSKPRNTPVTARPAFS 206
           +++N  +PRN P  A P+ S
Sbjct: 23  RWLNSQQPRNVPNFAAPSTS 42


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 368 QTLVDLEWARNITNAVNVLHFSSINKY 448
           +TL  L W   + N + +LH   I  Y
Sbjct: 187 ETLNQLIWFDEVVNELRILHGVEIRDY 213


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 172 NSGGCAFDIVMC 137
           N+G CAFD + C
Sbjct: 100 NTGRCAFDGICC 111


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 75  NGAPPRSTPPLSTPSNS 91


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 256 NGSKPRNTPVTARPAFS 206
           NG+ PR+TP  + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,584
Number of Sequences: 336
Number of extensions: 2637
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)