Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_D22
(597 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10275| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_51001| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_42059| Best HMM Match : RVT_1 (HMM E-Value=0.0011) 35 0.057
SB_38681| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 35 0.057
SB_6749| Best HMM Match : RVT_1 (HMM E-Value=0.069) 35 0.057
SB_55514| Best HMM Match : RVT_1 (HMM E-Value=0.014) 35 0.057
SB_34669| Best HMM Match : DUF572 (HMM E-Value=1.6e-39) 35 0.057
SB_33858| Best HMM Match : RVT_1 (HMM E-Value=3.7e-21) 35 0.057
SB_16275| Best HMM Match : RVT_1 (HMM E-Value=1.7e-16) 35 0.057
SB_59170| Best HMM Match : RVT_1 (HMM E-Value=0.13) 33 0.18
SB_15890| Best HMM Match : ArsC (HMM E-Value=0.94) 33 0.18
SB_18090| Best HMM Match : RVT_1 (HMM E-Value=0.59) 31 0.53
SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 31 0.53
SB_10773| Best HMM Match : TatC (HMM E-Value=0.31) 30 1.6
SB_37794| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_2479| Best HMM Match : SecA_PP_bind (HMM E-Value=0.94) 29 2.2
SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_37249| Best HMM Match : UDPGP (HMM E-Value=6.8e-18) 28 6.6
SB_35918| Best HMM Match : Equine_IAV_S2 (HMM E-Value=0.27) 27 8.7
SB_18527| Best HMM Match : LSM (HMM E-Value=1.3) 27 8.7
>SB_10275| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/70 (24%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNFFNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEFP 68
PRN+P + I+++ L+ N S ++ MCFL Y +T + ++++ C+++
Sbjct: 498 PRNSPSYLPFVANDINSYALARNMRLSAKKCKEMAMCFLTYNSTELAPMLINGCVIERVD 557
Query: 67 THRILSMNLT 38
+++L +++T
Sbjct: 558 CYKLLGVHIT 567
>SB_51001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 762 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 820
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 821 DCYKLLGVHIT 831
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 931 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 989
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 990 DCYKLLGVHIT 1000
>SB_42059| Best HMM Match : RVT_1 (HMM E-Value=0.0011)
Length = 272
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 141 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 199
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 200 DCYKLLGVHIT 210
>SB_38681| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 559
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 329 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 387
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 388 DCYKLLGVHIT 398
>SB_6749| Best HMM Match : RVT_1 (HMM E-Value=0.069)
Length = 387
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 231 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 289
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 290 DCYKLLGVHIT 300
>SB_55514| Best HMM Match : RVT_1 (HMM E-Value=0.014)
Length = 684
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 194 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 252
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 253 DCYKLLGVHIT 263
>SB_34669| Best HMM Match : DUF572 (HMM E-Value=1.6e-39)
Length = 593
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 23 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 81
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 82 DCYKLLGVHIT 92
>SB_33858| Best HMM Match : RVT_1 (HMM E-Value=3.7e-21)
Length = 692
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 462 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 520
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 521 DCYKLLGVHIT 531
>SB_16275| Best HMM Match : RVT_1 (HMM E-Value=1.7e-16)
Length = 409
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/71 (25%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y +T + ++++ C+++
Sbjct: 204 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSTELAPMLINGCVIERV 262
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 263 DCYKLLGVHIT 273
>SB_59170| Best HMM Match : RVT_1 (HMM E-Value=0.13)
Length = 679
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/71 (23%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y ++ + ++++ C+++
Sbjct: 449 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSSELAPMLINGCVIERV 507
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 508 DCYKLLGVHIT 518
>SB_15890| Best HMM Match : ArsC (HMM E-Value=0.94)
Length = 310
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/71 (23%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNF-LSMNF-FNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN+P + I+++ L+ N N+ C ++ MCFL Y ++ + ++++ C+++
Sbjct: 80 PRNSPSYLPFVANDINSYALARNMRLNAKKCK-EMAMCFLTYNSSELAPMLINGCVIERV 138
Query: 70 PTHRILSMNLT 38
+++L +++T
Sbjct: 139 DCYKLLGVHIT 149
>SB_18090| Best HMM Match : RVT_1 (HMM E-Value=0.59)
Length = 427
Score = 31.5 bits (68), Expect = 0.53
Identities = 9/38 (23%), Positives = 26/38 (68%)
Frame = -3
Query: 151 DIVMCFLKYYNTGINVIVVDFCILDEFPTHRILSMNLT 38
++ MCFL Y +T + ++++ C+++ +++L +++T
Sbjct: 229 EMAMCFLTYNSTELAPMLINGCVIERVDCYKLLGVHIT 266
>SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013)
Length = 499
Score = 31.5 bits (68), Expect = 0.53
Identities = 9/38 (23%), Positives = 26/38 (68%)
Frame = -3
Query: 151 DIVMCFLKYYNTGINVIVVDFCILDEFPTHRILSMNLT 38
++ MCFL Y +T + ++++ C+++ +++L +++T
Sbjct: 198 EMAMCFLTYNSTELAPMLINGCVIERVDCYKLLGVHIT 235
>SB_10773| Best HMM Match : TatC (HMM E-Value=0.31)
Length = 380
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 347 YNAGIFR-QTLVDLEWARNITNAVNVL 424
YN G+F+ +TL D EW IT+ NVL
Sbjct: 147 YNLGVFKTKTLEDEEWGLTITSLKNVL 173
>SB_37794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 750
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 244 PRNTPVTARPAFSFIDNFLSMN--FFNSGGCAFDIVMCFLKYYNTGINVIVVDFCILDEF 71
PRN P R ++++NF N N C ++ + FL+Y ++ I V +++
Sbjct: 537 PRNAPSVMRHMVNYVNNFAQNNNMLLNPSKCK-EMRVDFLQYNSSQCQPIAVGGSVIESV 595
Query: 70 PTHRILSMNL 41
+ ++L L
Sbjct: 596 TSFKLLGSQL 605
>SB_2479| Best HMM Match : SecA_PP_bind (HMM E-Value=0.94)
Length = 327
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 237 THR*QRDPHSALLTIFCP*IFSILVDVLLTL 145
+H+ Q DPH+A L++ C ++S D L+ +
Sbjct: 139 SHKAQEDPHNAFLSLLCHVVYSAEPDWLMNI 169
>SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 166 GGCAFDIVMCFLKYYNTGINVIVVDFCIL 80
GG D+V C L Y++ ++ V +CI+
Sbjct: 281 GGTTKDVVYCPLPLYHSAAGILAVGYCIV 309
>SB_37249| Best HMM Match : UDPGP (HMM E-Value=6.8e-18)
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 147 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRG 245
+S A P ++K +DK + IKLN G T L G
Sbjct: 249 VSHAEPADIKAALDKLVVIKLNGGLGTTMGLVG 281
>SB_35918| Best HMM Match : Equine_IAV_S2 (HMM E-Value=0.27)
Length = 111
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 88 CILDEFPTHRILSMNLTFLL 29
CILD +PT+ N+TFLL
Sbjct: 40 CILDHYPTYPFSFENVTFLL 59
>SB_18527| Best HMM Match : LSM (HMM E-Value=1.3)
Length = 198
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 243 GFDPFMNLVLDESVE 287
GFD +MNLVLDE+ E
Sbjct: 124 GFDEYMNLVLDEAEE 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,798,647
Number of Sequences: 59808
Number of extensions: 284103
Number of successful extensions: 727
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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