Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_D21
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = -1

Query: 281 ASSGTLRDGTLCRPVKRTCCTPDILYRFPS*HNSFRRYANSSYRTLDPSQNNITALRSRN 102
           +  G     +L  PV+   CTPD    + S        A+S       + N++    S N
Sbjct: 125 SGGGANLTNSLTGPVRPAACTPDSRVGYGSVGLVGGDPASSPGAAAGRTGNSL----SWN 180

Query: 101 NKCNKNKI-DHTSKTKLFMRSFHTFTP 24
           N C+ N        T++  ++ HTF P
Sbjct: 181 NPCSINSTSSQPVGTQIHQQTNHTFYP 207


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 80  FCFCYTYYFV 109
           F FCY YY +
Sbjct: 551 FAFCYCYYSI 560


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 56  VLFLKCDQFCFCYTYYFVISVL*YC 130
           +LFL C  + +     F I +L YC
Sbjct: 206 LLFLPCIYYFYSAFIIFTIHLLFYC 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,627
Number of Sequences: 336
Number of extensions: 2601
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)