Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_D19
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.7  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    21   6.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.8  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +3

Query: 330 KMNNNEVFSQEEQE---KLTKLFKVDEES 407
           K+NNN V S   QE      K +KV+E+S
Sbjct: 87  KLNNNNVVSSTNQEIRGPKRKTWKVEEDS 115


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 185 RLGYSTFGRKDVCDLDKNHSGVK*RNSCHQST 280
           + G S   +++  D DKN SGV   +  H S+
Sbjct: 36  QFGVSQIVKREPMDEDKNDSGVTSGSDFHSSS 67


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 541 TLTITSAFSSHNPRLFKSVLNVSGTKMNFN 452
           T+T   A +++N  L+K + N  G + N N
Sbjct: 196 TITFDDAINNNNIELYKEIFN--GKRKNPN 223


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 215 LSFQMYCIQGDPE 177
           +SF +YC+  +PE
Sbjct: 5   ISFALYCLANNPE 17


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 243 PGLSKGIHVINLL 281
           PG+S+ + VINL+
Sbjct: 190 PGMSENVDVINLM 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,930
Number of Sequences: 336
Number of extensions: 2602
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)