Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_D18
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 149 2e-36
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 145 2e-35
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 126 2e-29
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 91 5e-19
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 7e-15
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 62 4e-10
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 55 6e-08
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 52 5e-07
SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1) 42 4e-04
SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) 30 1.4
SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096) 30 1.4
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 29 3.3
SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 29 3.3
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_36238| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 28 5.8
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 28 5.8
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 149 bits (361), Expect = 2e-36
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 77 SSKMQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVI 256
+S QP I+LL+EGTD +QG PQL+SNI+ACQ + DAVRTTLGPRGMDKLIVD GKA I
Sbjct: 634 ASGPQPGIILLKEGTDASQGIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATI 693
Query: 257 SNDGATIMKLLDIIHPAAKTLVDIAKSQDAE 349
SNDGATI+ LLDI+HPAAKTLVDIAKSQDAE
Sbjct: 694 SNDGATIINLLDIVHPAAKTLVDIAKSQDAE 724
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 145 bits (352), Expect = 2e-35
Identities = 74/183 (40%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Frame = +2
Query: 98 ILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVD--HNGKAVISNDGA 271
+ +L +G ++ + + +S+ + D V++TLGP+GMDK++ NG ++NDGA
Sbjct: 6 VSILNQGAEEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILQSFGQNGNIQVTNDGA 65
Query: 272 TIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIR 451
TI+K + I +PAAK LV+++K QD EVGDGTTSV +L E+LK + V +HP+ ++
Sbjct: 66 TILKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIVA 125
Query: 452 AVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAV 631
R + + A EK E A + PE+ R+ L+ A T +SSK++ Q +DHF+K+ VDAV
Sbjct: 126 GWRKSVK-AAEKALEAAAVDHSSDPEKFREDLMNIARTTLSSKILVQHRDHFAKLAVDAV 184
Query: 632 LSL 640
L L
Sbjct: 185 LRL 187
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 126 bits (303), Expect = 2e-29
Identities = 61/164 (37%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Frame = +2
Query: 152 SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIA 331
S+I A + V ++T+LGP+GMDK++V +G+ ++NDGATI+ ++++ H AK +V+++
Sbjct: 34 SHILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVELS 93
Query: 332 KSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKI 511
KSQD E+GDGTT VV+LAG +L+ + ++ G+HP + A+++A+E + A
Sbjct: 94 KSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIA--- 150
Query: 512 DN-KSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 640
DN ++ ++ L++ A T + SK++ + ++I VDAVLS+
Sbjct: 151 DNFPVDKDNKESLIQTAMTTLGSKIVSRCHRPLAEIAVDAVLSV 194
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 91.5 bits (217), Expect = 5e-19
Identities = 47/105 (44%), Positives = 67/105 (63%)
Frame = +2
Query: 326 IAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAV 505
++K QD EVGDGTTSV +LA E+LK + V +HP+ ++ R + + A EK E A
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVK-AAEKALEAAA 60
Query: 506 KIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 640
+ PE+ RD L+ A T +SSK++ Q +DHF+K+ VDAVL L
Sbjct: 61 VDHSSDPEKFRDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRL 105
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/82 (46%), Positives = 61/82 (74%)
Frame = +2
Query: 254 ISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVH 433
++NDG I++ + + HPAAK++++I+++QD EVGDGTTSV+ILAGE + +PF+E+ +H
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60
Query: 434 PRVLIRAVRTASRLAIEKIKEQ 499
P +I A R A I+ +K+Q
Sbjct: 61 PTQIIAAYRLAMDDMIDILKQQ 82
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 85.4 bits (202), Expect = 4e-17
Identities = 46/119 (38%), Positives = 73/119 (61%)
Frame = +2
Query: 293 IIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASR 472
I HP A + +A +QD GDGTTS V++ GE+LK+ +V EG+HPR++ A +
Sbjct: 171 IQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGFEVAKK 230
Query: 473 LAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTP 649
A+E ++E VK+ S E RD L+ A T++ +K+ + D +++VVDAVL++ P
Sbjct: 231 KALEVLEE--VKV---SREMDRDTLINVAKTSLRTKVRTELADLLTEVVVDAVLTIRKP 284
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 77.8 bits (183), Expect = 7e-15
Identities = 34/71 (47%), Positives = 53/71 (74%)
Frame = +2
Query: 287 LDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTA 466
+ + HPAAK++++I+++QD EVGDGTTSV+ILAGE + +PF+E+ +HP +I A R A
Sbjct: 209 IQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLA 268
Query: 467 SRLAIEKIKEQ 499
I+ +K+Q
Sbjct: 269 MDDMIDILKQQ 279
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +2
Query: 476 AIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLD 643
AI++IKE AV + E R LL +CA+TA+SSKLI QK+ F+K+VVDAV+ LD
Sbjct: 1 AIKRIKELAVHVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLD 56
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Frame = +2
Query: 137 KPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDII 298
KPQ + +NI A + V DA+RT+LGP+GMDK+I NG I+NDGATI KL+D +
Sbjct: 21 KPQEIRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATI-KLIDTV 75
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +2
Query: 176 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI----IHPAAKTLVDIAKSQD 343
+ DAV TLGP+G + +I G I+ DG T+ K +++ + A+ + D+A + +
Sbjct: 79 LADAVAVTLGPKGKNVIIEQSFGGPKITKDGVTVAKAIELKDKYQNIGARLVQDVANNTN 138
Query: 344 AEVGDGTTSVVILAGEILKRLKPFVEEGVHPR 439
E GDGTT+ +LA I V +G +P+
Sbjct: 139 EEAGDGTTTATVLARSIATEGFLHVSKGANPQ 170
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +2
Query: 158 INACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKS 337
+ CQ ++ + GP G+D ++ +G +I+N G+ I++ L + +P + +V+ A+S
Sbjct: 6 LQTCQNFERILKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARS 65
Query: 338 QDAEVGDGTTSVVILAGEILKRL 406
G G + +I+ EI + +
Sbjct: 66 LSGRTGSGASYFIIILAEIFREI 88
>SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)
Length = 131
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +2
Query: 536 RDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 640
RD ++ A+TA+SSKLI QQ D F+ ++VDAV+++
Sbjct: 10 RDCIVSAANTALSSKLIGQQGDFFANMIVDAVMAV 44
>SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 386 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 499
GE + +PF+E+ +HP +I A R A I+ +K+Q
Sbjct: 2 GEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 39
>SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1)
Length = 269
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 160 QCLSTCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEATGYHSPCR*NSC 321
QC + C+ G++ GSP +ADC GG ++ C H + C SC
Sbjct: 145 QCCRSVCKVGRDCVGSPCSSRADC-----GGPFEQSCCGHRCV-FGKSCYGRSC 192
>SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096)
Length = 191
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 160 QCLSTCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEATGYHSPCR*NSC 321
QC + C+ G++ GSP +ADC GG ++ C H + C SC
Sbjct: 67 QCCRSVCKVGRDCVGSPCSSRADC-----GGPFEQSCCGHRCV-FGKSCYGRSC 114
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +1
Query: 163 CLSTCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWC-NDHEATGYHSPCR*NSCGYC 330
C TC C N SP+ GQ +C S + G ++ C D C G C
Sbjct: 142 CQGTC-DCKNNATCSPFTGQCNCTSGFTGDRCEKQCAGDSGGVDCRQHCNCTEWGTC 197
>SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 327
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 175 CCRCGQNHPGSPW-YGQADCRSQWKGGYIKRWC 270
C RCG+NHP S + +A C K G+I C
Sbjct: 92 CYRCGKNHPPSKCRFKEATCHYCKKKGHIVAKC 124
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -1
Query: 429 TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAISTRVLAAG*MISSSFMIVAPSFDIT 250
TP+++N F + T V+P PTSAS S+ I+++ V PS T
Sbjct: 447 TPTASNAFTETTTVTSTTTITVLPQPTSASSSITPSSTPATGTATIATATYSVPPSVAPT 506
Query: 249 A 247
A
Sbjct: 507 A 507
>SB_36238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 458 RTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVD 625
RTA + I + + +S +E LL+C ++SK QK++ +KI++D
Sbjct: 50 RTAENSSYPSIASEISSVARESRDED---LLRCDEVTINSKDEETQKENGNKIIID 102
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +1
Query: 217 GQADCRSQWKGGYIKRWCNDHEATGYHSPC 306
G DC W GG +C H + H C
Sbjct: 1128 GSKDCHDGWYGGTCSIYCLPHNGSSGHYDC 1157
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 238 QWKGGYIKRWCNDHEATGY-HSPCR*NSCGYC 330
+WKG WCND + Y CR +CGYC
Sbjct: 817 KWKG---YGWCNDGDHDKYMEEVCR-KTCGYC 844
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 428 VHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRD---LLLKCAS 562
V P + + R A R+ K + DNK P+E+ D L KCAS
Sbjct: 863 VRPTYMYKHCRLACRVCTPVKKHEGPPCDNKDPDEECDHWAKLGKCAS 910
>SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1388
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 145 ARLQHQCLSTCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEAT 288
+RLQH+C++ C CG++ SP + +W Y CN + T
Sbjct: 412 SRLQHKCVNLCYGCGES-DCSPLVPPPEQDHRWDWKYCPE-CNRYFRT 457
>SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 137 KPQLVSNINACQLVVDAVRTTLGPRGMD 220
K L+S I C LV +A +T+G +G D
Sbjct: 26 KKDLISEIRHCYLVSNAYPSTVGAKGFD 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,043,680
Number of Sequences: 59808
Number of extensions: 424680
Number of successful extensions: 1270
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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