Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_D10
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11115-1|CAA77449.2|  143|Caenorhabditis elegans Hypothetical pr...   100   2e-21
U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical p...    30   1.2  
U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical p...    30   1.2  
U64833-1|AAB04814.1|  857|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z11115-1|CAA77449.2|  143|Caenorhabditis elegans Hypothetical
           protein ZK637.2 protein.
          Length = 143

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 41/136 (30%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
 Frame = +2

Query: 98  VEAQKYRIEQEMTNLVNELDRSYLRKMQGDMHRCASKCCDDTQSSLERVHGCIENCTTPL 277
           +EA + +++  +  ++++LD++YLR MQ  M +C+++CCD+ +++ + V  C+E+C   +
Sbjct: 6   MEATQMKVKLAVDEMIDDLDKTYLRDMQKSMFQCSARCCDNKKTTRDAVENCVESCNDGM 65

Query: 278 NHANNYVQNEINHFQNRLQRCVMDCNDTARDRLGPDPSQ-ETIDKCTID--FEKCAVKCV 448
             A  Y++ E+   Q++L RC M C D    + GPD ++     K + +   + C   C 
Sbjct: 66  KKAQGYLEKELGGLQDQLSRCAMTCYDKLVQQFGPDVNKYSESQKLSFNEKLDSCVSVCA 125

Query: 449 DKHMSLIPGMMKTMKK 496
           D H+ LIP + K   K
Sbjct: 126 DDHIKLIPAIKKRFAK 141


>U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical
           protein F46F11.1b protein.
          Length = 1225

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +2

Query: 83  NKLKMVEAQKYRIEQEMTNLVNE-LDRSYLRKMQGDMHRC-ASKCCDDTQSSLERVHGCI 256
           N   +V  Q+Y I+ E   ++ + +    LRK++ D+HRC  +K  ++TQ+ L+      
Sbjct: 768 NMADIVVPQEYGIKTENKMVIAQRVCTPLLRKIRNDLHRCLENKESEETQTRLD--PRAS 825

Query: 257 ENCTTPLNH 283
           +   TP  H
Sbjct: 826 QGIATPFRH 834


>U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical
           protein F46F11.1a protein.
          Length = 1339

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +2

Query: 83  NKLKMVEAQKYRIEQEMTNLVNE-LDRSYLRKMQGDMHRC-ASKCCDDTQSSLERVHGCI 256
           N   +V  Q+Y I+ E   ++ + +    LRK++ D+HRC  +K  ++TQ+ L+      
Sbjct: 768 NMADIVVPQEYGIKTENKMVIAQRVCTPLLRKIRNDLHRCLENKESEETQTRLD--PRAS 825

Query: 257 ENCTTPLNH 283
           +   TP  H
Sbjct: 826 QGIATPFRH 834


>U64833-1|AAB04814.1|  857|Caenorhabditis elegans Hypothetical
           protein B0507.6 protein.
          Length = 857

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +2

Query: 107 QKYRIEQEMTNLVNELDRSYLRKMQGDMHRCASKCCDDTQSSLER--VHGCIENCTTPLN 280
           +K + E E+  L NEL    + +    M   A K   D Q    +  +HGC +N +  LN
Sbjct: 499 KKRKFEDEIRKLKNEL----IERFNMIMSCIALKRKFDIQEDYWKDWIHGCRQNISKLLN 554

Query: 281 HANNYVQNEINHFQNRLQRCVMDCND 358
           H + +V +  +H     +   +D N+
Sbjct: 555 HCHQFVYDVNSHSYGLRESKNVDFNE 580


>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
           protein T06E4.1 protein.
          Length = 1295

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 92  KMVEAQKYRIEQEMTNLVNELDRSYLRKMQGDMHRCASKCCDDTQSSLE 238
           K++  + +R+E EM+ L  + D + L ++Q  +      CC+ T   LE
Sbjct: 404 KLMLDEIHRLENEMSALQPKNDTTELEELQKTLDDLKIDCCNLTSKMLE 452


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,841,032
Number of Sequences: 27780
Number of extensions: 310410
Number of successful extensions: 773
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)