Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_D02
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 220 1e-58
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 161 8e-41
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 151 1e-37
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 145 4e-36
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 139 4e-34
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 123 3e-29
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 110 1e-25
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 102 4e-23
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 59 5e-10
SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransfer... 27 1.8
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 27 3.1
SPAC23G3.11 |rpn6||19S proteasome regulatory subunit Rpn6|Schizo... 25 7.2
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 220 bits (538), Expect = 1e-58
Identities = 103/164 (62%), Positives = 136/164 (82%)
Frame = +2
Query: 161 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV 340
++D+ KP ++RLSNI AA++VADAIRTSLGP+GMDKMIQ GEV +TNDGATILK +SV
Sbjct: 11 FQDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSV 70
Query: 341 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQL 520
+HPAAKMLV+LS AQD+EAGDGTTSVV++AG+ L A KLL KGIHPTVI++ FQ+A
Sbjct: 71 LHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGF 130
Query: 521 ALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
+ ++ + ++L++ ++LL+AA TSLNSK+VSQ+S +LAPIA
Sbjct: 131 TVDCMKENALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIA 174
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 161 bits (391), Expect = 8e-41
Identities = 86/168 (51%), Positives = 118/168 (70%), Gaps = 2/168 (1%)
Frame = +2
Query: 155 QXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQM 334
Q K + D S+I A K VA+ +RTSLGPRG+DK++ + +GE+T+TNDGATIL QM
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83
Query: 335 SVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKAL 514
V H AK+LV+LS++QD E GDGTT VVV+AGA L+ A L+ KGIHP I+DG++KA
Sbjct: 84 EVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKAC 143
Query: 515 QLALQVVENMSTPVDLNNEDA--LLKAAATSLNSKVVSQHSTILAPIA 652
Q+A++ ++ +S VD + E+ L ++A TSL SKVVS+ A IA
Sbjct: 144 QVAVKHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIA 191
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 151 bits (365), Expect = 1e-37
Identities = 78/167 (46%), Positives = 112/167 (67%), Gaps = 4/167 (2%)
Frame = +2
Query: 146 LILQXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATIL 325
++L+ D S+ LSNINA AV D IRT+LGP G DK++ GEV I+NDGATI+
Sbjct: 11 IVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIM 70
Query: 326 KQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQ 505
K + ++HPAAK LV+++RAQD E GDGTTSVVV AG L A + G+ +I G++
Sbjct: 71 KLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYR 130
Query: 506 KALQLALQVVENMSTPVDLNNE----DALLKAAATSLNSKVVSQHST 634
KA QLA+ ++ ++ +DL++E D L K A+T++NSK++ +ST
Sbjct: 131 KAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNST 177
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 145 bits (352), Expect = 4e-36
Identities = 69/154 (44%), Positives = 107/154 (69%)
Frame = +2
Query: 191 RLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVE 370
++SNI AAKAVAD IRT LGPR M KM+ G V +TNDG IL+++ V HPAAK ++E
Sbjct: 21 QMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIE 80
Query: 371 LSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMST 550
L+R QD E GDGTTSV+++AG L +A LL + IHP V+ F++AL+ AL +++ ++
Sbjct: 81 LARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITL 140
Query: 551 PVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
PV++++ + + T + +K+V++ S ++ +A
Sbjct: 141 PVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLA 174
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 139 bits (336), Expect = 4e-34
Identities = 70/163 (42%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Frame = +2
Query: 167 DKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIH 346
+K D+R N+ A A+A+ +++SLGP G+DKM+ G+VT+TNDGATIL + V H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 347 PAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLAL 526
PA K+LVEL++ QD E GDGTTSVV+IA L A +L+ IHPT I G++ A++ A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 527 Q-VVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
+ + + +S VD +++L+ A TS++SK++ S + +A
Sbjct: 135 KFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMA 177
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 123 bits (296), Expect = 3e-29
Identities = 67/160 (41%), Positives = 104/160 (65%), Gaps = 6/160 (3%)
Frame = +2
Query: 191 RLSNINAAKAVADAIRTSLGPRGMDKMIQA-ANGEVTITNDGATILKQMSVIHPAAKMLV 367
RLS+ A AV D ++++LGP+GMDK++Q+ ++G++ +TNDGATILK +++ + AAK+LV
Sbjct: 22 RLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAAAKVLV 81
Query: 368 ELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQV----- 532
+S+ QD E GDGTTSV V A L A ++ IHP VI DG++ A + A+
Sbjct: 82 NISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASS 141
Query: 533 VENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
++N S P ++ L A T+L+SK++SQ+ A +A
Sbjct: 142 IDNSSDPAKFRSD--LENIARTTLSSKILSQNKNHFAQLA 179
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 110 bits (265), Expect = 1e-25
Identities = 56/149 (37%), Positives = 89/149 (59%)
Frame = +2
Query: 200 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSR 379
NI+AA + D ++++LGP G KM+ G + +T DG +L +M + +P A + + +
Sbjct: 21 NISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAAT 80
Query: 380 AQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVD 559
AQD GDGTTSV ++ G L A + +G+HP++ISDGF A AL +++ T +
Sbjct: 81 AQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFE 140
Query: 560 LNNEDALLKAAATSLNSKVVSQHSTILAP 646
++ E LL A TSL++K+ S+ LAP
Sbjct: 141 VDRE-VLLNVAKTSLSTKISSKVVESLAP 168
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 102 bits (245), Expect = 4e-23
Identities = 53/159 (33%), Positives = 91/159 (57%), Gaps = 2/159 (1%)
Frame = +2
Query: 143 KLILQXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATI 322
+L + Y+ D + N NA + +++ RTSLGP G +K++ + +TND ATI
Sbjct: 12 QLFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATI 71
Query: 323 LKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGF 502
++++ VIHPAAK++V+ ++ Q+ E GD VVV G L A ++ G+ P I+ G+
Sbjct: 72 IRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGY 131
Query: 503 QKALQLALQVVENMSTP--VDLNNEDALLKAAATSLNSK 613
+ AL ++V+E + + +E L+KA T ++SK
Sbjct: 132 EMALSHTMEVLEEICADKIETVESEKELIKAIRTCISSK 170
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 59.3 bits (137), Expect = 5e-10
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Frame = +2
Query: 164 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV- 340
KD D R S + +A A+ +LGP+G + +I G IT DG T+ + +S+
Sbjct: 35 KDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLK 94
Query: 341 ---IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKA 511
+ A+++ +++ + AGDGTT+ V+ A + + G +P + G Q A
Sbjct: 95 DKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLA 154
Query: 512 LQLALQVVENMSTPVDLNNEDALLKAAATSLN 607
+ ++ ++ + D+ + + + A S N
Sbjct: 155 VDNVVEFLQ--ANKRDITTSEEISQVATISAN 184
>SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransferase
Mam4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 334 ECYSSSCKNVGRIISCSRY*SW*WNNISSCYCWCVVGF 447
EC S K+ ++I+C R+ S+ N I S Y +GF
Sbjct: 87 ECLLSGGKSFAKVINCLRFPSFLINFIFSVYQTSALGF 124
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 592 CNITKFQSSFTTLNYFGT 645
CNI KF SSF T N F T
Sbjct: 276 CNIPKFNSSFKTSNDFFT 293
>SPAC23G3.11 |rpn6||19S proteasome regulatory subunit
Rpn6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 506 KALQLALQVVENMSTPVDL---NNEDALL 583
K + AL+V++NM T VDL N ALL
Sbjct: 393 KTYEAALEVIKNMGTVVDLLIENKASALL 421
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,391,377
Number of Sequences: 5004
Number of extensions: 43733
Number of successful extensions: 123
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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