BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_D02 (654 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 161 3e-40 SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 129 2e-30 SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 95 6e-20 SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 91 7e-19 SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14 SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14 SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 65 5e-11 SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11 SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 56 2e-08 SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 55 6e-08 SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 29 3.3 >SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) Length = 505 Score = 161 bits (392), Expect = 3e-40 Identities = 82/154 (53%), Positives = 118/154 (76%), Gaps = 2/154 (1%) Frame = +2 Query: 197 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELS 376 S+I AA+AVA ++TSLGP+GMDKM+ + +GEVT+TNDGATIL M V H AK++VELS Sbjct: 34 SHILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVELS 93 Query: 377 RAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMST-- 550 ++QD E GDGTT VVV+AGA L+ A +LL GIHP I+DG++ A ++AL+ +++++ Sbjct: 94 KSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIADNF 153 Query: 551 PVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652 PVD +N+++L++ A T+L SK+VS+ LA IA Sbjct: 154 PVDKDNKESLIQTAMTTLGSKIVSRCHRPLAEIA 187 >SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) Length = 531 Score = 129 bits (312), Expect = 2e-30 Identities = 70/173 (40%), Positives = 108/173 (62%), Gaps = 5/173 (2%) Frame = +2 Query: 149 ILQXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQA--ANGEVTITNDGATI 322 IL ++ + RLS+ A A+ D ++++LGP+GMDK++Q+ NG + +TNDGATI Sbjct: 8 ILNQGAEEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILQSFGQNGNIQVTNDGATI 67 Query: 323 LKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGF 502 LK + + +PAAK+LVELS+ QD E GDGTTSV V+ L A KL+ IHP I G+ Sbjct: 68 LKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIVAGW 127 Query: 503 QKALQLALQVVENMSTPVDLNNE---DALLKAAATSLNSKVVSQHSTILAPIA 652 +K+++ A + +E + + E + L+ A T+L+SK++ QH A +A Sbjct: 128 RKSVKAAEKALEAAAVDHSSDPEKFREDLMNIARTTLSSKILVQHRDHFAKLA 180 >SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) Length = 186 Score = 94.7 bits (225), Expect = 6e-20 Identities = 43/54 (79%), Positives = 49/54 (90%) Frame = +2 Query: 161 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATI 322 +KDK KP +IR++NI AAKAVADAIRTSLGP+GMDKMIQ NG+VTITNDGATI Sbjct: 16 FKDKEKPQEIRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATI 69 >SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) Length = 724 Score = 91.1 bits (216), Expect = 7e-19 Identities = 40/83 (48%), Positives = 62/83 (74%) Frame = +2 Query: 146 LILQXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATIL 325 ++L+ D S+ +SNI+A + +ADA+RT+LGPRGMDK+I G+ TI+NDGATI+ Sbjct: 642 ILLKEGTDASQGIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATISNDGATII 701 Query: 326 KQMSVIHPAAKMLVELSRAQDIE 394 + ++HPAAK LV+++++QD E Sbjct: 702 NLLDIVHPAAKTLVDIAKSQDAE 724 >SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 118 Score = 77.4 bits (182), Expect = 1e-14 Identities = 34/80 (42%), Positives = 54/80 (67%) Frame = +2 Query: 299 ITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIH 478 +TNDG IL+++ V HPAAK ++E+SR QD E GDGTTSV+++AG + A L + +H Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60 Query: 479 PTVISDGFQKALQLALQVVE 538 PT I ++ A+ + +++ Sbjct: 61 PTQIIAAYRLAMDDMIDILK 80 >SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 762 Score = 75.8 bits (178), Expect = 3e-14 Identities = 38/118 (32%), Positives = 69/118 (58%) Frame = +2 Query: 296 TITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGI 475 T+ G ++ + HP A ++ ++ AQD GDGTTS V+I G L A + +G+ Sbjct: 157 TMNPFGQNGVQNSQIQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGL 216 Query: 476 HPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPI 649 HP ++++GF+ A + AL+V+E + ++ + D L+ A TSL +KV ++ + +L + Sbjct: 217 HPRLVTEGFEVAKKKALEVLEEVKVSREM-DRDTLINVAKTSLRTKVRTELADLLTEV 273 >SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) Length = 144 Score = 64.9 bits (151), Expect = 5e-11 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 3/97 (3%) Frame = +2 Query: 371 LSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMST 550 LS+ QD E GDGTTSV V+A L A KL+ IHP I G++K+++ A + +E + Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALEAAAV 61 Query: 551 PVDLNNE---DALLKAAATSLNSKVVSQHSTILAPIA 652 + E D L+ A T+L+SK++ QH A +A Sbjct: 62 DHSSDPEKFRDDLMNIARTTLSSKILVQHRDHFAKLA 98 >SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 315 Score = 64.1 bits (149), Expect = 9e-11 Identities = 28/70 (40%), Positives = 46/70 (65%) Frame = +2 Query: 329 QMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQK 508 ++ V HPAAK ++E+SR QD E GDGTTSV+++AG + A L + +HPT I ++ Sbjct: 208 KIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRL 267 Query: 509 ALQLALQVVE 538 A+ + +++ Sbjct: 268 AMDDMIDILK 277 >SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) Length = 278 Score = 56.4 bits (130), Expect = 2e-08 Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 185 DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV----IHPA 352 + R + + +ADA+ +LGP+G + +I+ + G IT DG T+ K + + + Sbjct: 67 EARAAMLQGVDTLADAVAVTLGPKGKNVIIEQSFGGPKITKDGVTVAKAIELKDKYQNIG 126 Query: 353 AKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVIS 493 A+++ +++ + EAGDGTT+ V+A + + KG +P +S Sbjct: 127 ARLVQDVANNTNEEAGDGTTTATVLARSIATEGFLHVSKGANPQEVS 173 >SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) Length = 563 Score = 54.8 bits (126), Expect = 6e-08 Identities = 21/65 (32%), Positives = 43/65 (66%) Frame = +2 Query: 233 IRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTT 412 ++ S GP G+D M+++++G + ITN G+ IL+ +++ +P +M+VE +R+ G G + Sbjct: 16 LKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARSLSGRTGSGAS 75 Query: 413 SVVVI 427 ++I Sbjct: 76 YFIII 80 >SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) Length = 559 Score = 29.1 bits (62), Expect = 3.3 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = +2 Query: 350 AAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQ 529 A++ML E+SR GD + ++G L KLL +HP I G K L +Q Sbjct: 238 ASQMLYEVSRL----LGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGTPKRLWEIVQ 293 Query: 530 VVENM 544 E++ Sbjct: 294 EHEHL 298 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,452,041 Number of Sequences: 59808 Number of extensions: 316041 Number of successful extensions: 651 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 547 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 645 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1669334250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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