Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_D02
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 215 2e-56
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 161 5e-40
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 147 6e-36
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 140 6e-34
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 135 3e-32
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 125 2e-29
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 114 4e-26
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 112 2e-25
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 112 2e-25
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 93 1e-19
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 67 8e-12
At3g13470.1 68416.m01695 chaperonin, putative similar SWISS-PROT... 67 1e-11
At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta su... 67 1e-11
At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta su... 67 1e-11
At1g26230.1 68414.m03200 chaperonin, putative similar to SWISS-P... 63 2e-10
At3g13860.1 68416.m01751 chaperonin, putative similar to SWISS-P... 62 2e-10
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 61 7e-10
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 56 2e-08
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 55 5e-08
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 52 3e-07
At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit, pu... 41 6e-04
At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A... 29 3.6
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 215 bits (525), Expect = 2e-56
Identities = 104/166 (62%), Positives = 131/166 (78%)
Frame = +2
Query: 155 QXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQM 334
+ + D + DIR +NIN+A+AV+DA+RTSLGP+GMDKMI ANGEV ITNDGATIL +M
Sbjct: 18 ESFVDNKRREDIRFANINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKM 77
Query: 335 SVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKAL 514
V+ PAAKMLVELS++QD AGDGTT+VVVIAGA L LL GIHPTVISD KA
Sbjct: 78 EVLQPAAKMLVELSKSQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKAC 137
Query: 515 QLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
A+ ++ M+ PV+L + D+L+K+A+TSLNSKVVSQ+ST+LAP+A
Sbjct: 138 GKAIDILTAMAVPVELTDRDSLVKSASTSLNSKVVSQYSTLLAPLA 183
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 161 bits (390), Expect = 5e-40
Identities = 81/168 (48%), Positives = 121/168 (72%), Gaps = 2/168 (1%)
Frame = +2
Query: 155 QXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQM 334
Q K + + D + +NI A KAVA +R+SLGP+GMDKM+Q +G++TITNDGATIL+QM
Sbjct: 18 QDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQM 77
Query: 335 SVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKAL 514
V + AK++VELSR+QD E GDGTT VVV+AGA L+ A + L +GIHP I++G++ A
Sbjct: 78 DVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMAS 137
Query: 515 QLALQVVENMST--PVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
++A++ +E ++ D+NN + L++ T+L+SK+V++ LA IA
Sbjct: 138 RVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIA 185
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 147 bits (356), Expect = 6e-36
Identities = 72/169 (42%), Positives = 106/169 (62%)
Frame = +2
Query: 146 LILQXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATIL 325
L+L + + + NI A+KAVAD IRT+LGPR M KM+ A G + +TNDG IL
Sbjct: 6 LVLSDSLKRESGSKVHHGNIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNAIL 65
Query: 326 KQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQ 505
+++ V HPAAK ++ELSR QD E GDGTTSV+V+AG L A L K HPTVI +
Sbjct: 66 RELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYI 125
Query: 506 KALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
KAL+ ++ V++ ++ +D+N+ +L + + +K SQ ++A +A
Sbjct: 126 KALEDSIAVLDKIAMSIDINDRSQVLGLVKSCIGTKFTSQFGDLIADLA 174
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 140 bits (340), Expect = 6e-34
Identities = 72/160 (45%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Frame = +2
Query: 167 DKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIH 346
D+ D+R N+ A +AV++ ++TSLGP G+DKM+ G+VTITNDGATIL+ + V H
Sbjct: 13 DRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEH 72
Query: 347 PAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLAL 526
PAAK+LVEL+ QD E GDGTTSVV++A L A L+ IHPT I G++ A++ +
Sbjct: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESC 132
Query: 527 QVV-ENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILA 643
+ + E + T V+ + L+ A TS++SK++S S A
Sbjct: 133 KYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFA 172
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 135 bits (326), Expect = 3e-32
Identities = 69/170 (40%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Frame = +2
Query: 146 LILQXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATIL 325
++L+ D S+ +SNINA AV D +RT+LGPRGMDK+I G VTI+NDGATI+
Sbjct: 10 ILLKEGTDTSQGKAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATIM 69
Query: 326 KQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQ 505
K + ++HPAAK+LV+++++QD E GDGTT+VV++A L A + G+H + ++
Sbjct: 70 KLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYR 129
Query: 506 KALQLALQVVENMSTPVD---LNNEDALL-KAAATSLNSKVVSQHSTILA 643
A LA+ V+ ++ ++ + + LL K AAT+L+SK++ A
Sbjct: 130 TASTLAIAKVKELAVSIEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFA 179
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 125 bits (302), Expect = 2e-29
Identities = 72/180 (40%), Positives = 110/180 (61%), Gaps = 7/180 (3%)
Frame = +2
Query: 134 MLLKLILQXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG--EVTITN 307
M + I + + K R+++ A A++D ++++LGP+GMDK++Q+ VT+TN
Sbjct: 1 MPIDKIFKDDASEEKGERARMASFVGAMAISDLVKSTLGPKGMDKILQSTGRGHAVTVTN 60
Query: 308 DGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTV 487
DGATILK + + +PAAK+LV++S+ QD E GDGTTSVVV+AG L A KL+ IHP
Sbjct: 61 DGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMT 120
Query: 488 ISDGFQKALQ-----LALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
I G++ A + L +V++N ++ LLK A T+L SK++SQ A +A
Sbjct: 121 IIAGYRMASECARNALLKRVIDNKDNAEKFRSD--LLKIAMTTLCSKILSQDKEHFAEMA 178
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 114 bits (275), Expect = 4e-26
Identities = 54/141 (38%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
Frame = +2
Query: 203 INAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRA 382
INAAK + D ++++LGP+G KM+ +G++ +T DG T+LK+M + +P A M+ + A
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82
Query: 383 QDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVDL 562
QD +GDGTTS V+ G + + + + +G+HP V+ DGF+ A + LQ ++N TPV +
Sbjct: 83 QDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLDNFKTPVVM 142
Query: 563 NNE---DALLKAAATSLNSKV 616
+E + L A T+L +K+
Sbjct: 143 GDEVDKEILKMVARTTLRTKL 163
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 112 bits (269), Expect = 2e-25
Identities = 57/168 (33%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Frame = +2
Query: 146 LILQXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATIL 325
++ + Y+ S + + NI A K ++ RTSLGP GM+KM+ ++ +TND ATI+
Sbjct: 14 MLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 73
Query: 326 KQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQ 505
++ + HPAAK+LV ++AQ E GDG + AG L +A +L+ G+HP+ I G+
Sbjct: 74 NELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYT 133
Query: 506 KALQLALQVVENM----STPVDLNNEDALLKAAATSLNSKVVSQHSTI 637
KA+ A++++E + S +D+ N+D ++ ++ SK Q I
Sbjct: 134 KAVSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQEEII 181
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 112 bits (269), Expect = 2e-25
Identities = 53/141 (37%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
Frame = +2
Query: 203 INAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRA 382
INAAK + D ++++LGP+G KM+ +G++ +T DG T+LK+M + +P A M+ + A
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82
Query: 383 QDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVDL 562
QD +GDGTTS V+ G + + + + +G+HP V+ DGF+ A + LQ ++ TPV +
Sbjct: 83 QDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLDTFKTPVVM 142
Query: 563 NNE---DALLKAAATSLNSKV 616
+E + L A T+L +K+
Sbjct: 143 GDEPDKEILKMVARTTLRTKL 163
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 93.5 bits (222), Expect = 1e-19
Identities = 48/109 (44%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Frame = +2
Query: 332 MSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKA 511
M V + AK++VELSR+QD E GDGTT VVV+AGA L+ A + L +GIHP I++G++ A
Sbjct: 1 MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMA 60
Query: 512 LQLALQVVENMST--PVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 652
++A++ +E ++ D+NN + L++ T+L+SK+V++ LA IA
Sbjct: 61 SRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIA 109
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 67.3 bits (157), Expect = 8e-12
Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Frame = +2
Query: 221 VADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQD 388
+AD + +LGP+G + ++++ G I NDG T+ +++ + P AK++ + + +
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAASKTN 133
Query: 389 IEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVDLNN 568
AGDGTT+ VV+A + K++ G +P +I+ G +K + + ++ MS V+ ++
Sbjct: 134 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVAELKKMSKEVE-DS 192
Query: 569 EDALLKAAATSLNSKVVSQHSTILAPI 649
E A + A + N +V + + +A +
Sbjct: 193 ELADVAAVSAGNNYEVGNMIAEAMAKV 219
>At3g13470.1 68416.m01695 chaperonin, putative similar
SWISS-PROT:P21240- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Arabidopsis thaliana]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 596
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Frame = +2
Query: 221 VADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQD 388
+AD + +LGP+G + ++++ G I NDG T+ +++ + P AK++ + + +
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 133
Query: 389 IEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVDLNN 568
AGDGTT+ VV+A + K++ G +P +I+ G +K + + ++ MS V+ ++
Sbjct: 134 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVNELKLMSKEVE-DS 192
Query: 569 EDALLKAAATSLNSKVVSQHSTILAPI 649
E A + A + N +V S + ++ +
Sbjct: 193 ELADVAAVSAGNNHEVGSMIAEAMSKV 219
>At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 66.9 bits (156), Expect = 1e-11
Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Frame = +2
Query: 221 VADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQD 388
+AD + +LGP+G + ++++ G I NDG T+ +++ + P AK++ + + +
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 137
Query: 389 IEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVDLNN 568
AGDGTT+ VV+A + K++ G +P +I+ G +K + + ++ MS V+ ++
Sbjct: 138 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVE-DS 196
Query: 569 EDALLKAAATSLNSKV 616
E A + A + N ++
Sbjct: 197 ELADVAAVSAGNNDEI 212
>At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 66.9 bits (156), Expect = 1e-11
Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Frame = +2
Query: 221 VADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQD 388
+AD + +LGP+G + ++++ G I NDG T+ +++ + P AK++ + + +
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 137
Query: 389 IEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVDLNN 568
AGDGTT+ VV+A + K++ G +P +I+ G +K + + ++ MS V+ ++
Sbjct: 138 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVE-DS 196
Query: 569 EDALLKAAATSLNSKV 616
E A + A + N ++
Sbjct: 197 ELADVAAVSAGNNDEI 212
>At1g26230.1 68414.m03200 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 611
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/120 (27%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Frame = +2
Query: 212 AKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDI 391
A VA + +LGP+G + ++Q G I NDG T+LK++ + P + V+L R
Sbjct: 59 ADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAGA 118
Query: 392 E----AGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVD 559
+ AGDG+T+ +++A + K++ G +P ++ G +K + + +++MS ++
Sbjct: 119 KTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGIEKTTKALVLELKSMSREIE 178
>At3g13860.1 68416.m01751 chaperonin, putative similar to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana] ; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 572
Score = 62.5 bits (145), Expect = 2e-10
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Frame = +2
Query: 164 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVI 343
KD S R + + VA+A++ ++GP+G + +I+++ G IT DG T+ K +S
Sbjct: 34 KDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAKSISFQ 93
Query: 344 HPA----AKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKA 511
A A+++ +++ A + AGDGTT V+ A L K + G++ + G A
Sbjct: 94 AKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILIEGCKSVAAGVNVMDLRVGINMA 153
Query: 512 LQLALQVVENMSTPVDLNNEDALLKAAATSLNSK 613
+A V + S V ++ + + + A S N +
Sbjct: 154 --IAAVVSDLKSRAVMISTPEEITQVATISANGE 185
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 60.9 bits (141), Expect = 7e-10
Identities = 35/130 (26%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Frame = +2
Query: 221 VADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQM----SVIHPAAKMLVELSRAQD 388
+ADA+ +LGPRG + ++ A + + NDG TI K + ++ + A ++ E++ +
Sbjct: 55 LADAVSITLGPRGRN-VVLAEKDTIKVINDGVTIAKSIELPDTIENAGATLIQEVAIKMN 113
Query: 389 IEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVDLNN 568
AGDGTT+ +++A + + + G + + +G K ++ ++V++ S PV N
Sbjct: 114 ESAGDGTTTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVRVLQMKSIPVQGKN 173
Query: 569 EDALLKAAAT 598
+ +KA A+
Sbjct: 174 D---IKAVAS 180
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/142 (22%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Frame = +2
Query: 164 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMS-- 337
KD + R + + +ADA++ ++GP+G + +I+ + G +T DG T+ K +
Sbjct: 35 KDIRFGVEARALMLRGVEDLADAVKVTMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFK 94
Query: 338 --VIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKA 511
+ + A ++ +++ A + AGDGTT V+ A K + G++ + G + A
Sbjct: 95 DRIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLA 154
Query: 512 LQLALQVVENMSTPVDLNNEDA 577
+ + +++ + + + E A
Sbjct: 155 VDTVVTNLQSRARMISTSEEIA 176
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/135 (22%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Frame = +2
Query: 185 DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQM----SVIHPA 352
+ R + + +ADA++ ++GP+G + +I+ + G +T DG T+ K + + +
Sbjct: 41 EARALMLKGVEDLADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVG 100
Query: 353 AKMLVELSRAQDIEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQV 532
A ++ +++ A + AGDGTT V+ A K + G++ + G A+ +
Sbjct: 101 ASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTN 160
Query: 533 VENMSTPVDLNNEDA 577
+++ + + + E A
Sbjct: 161 LKSKARMISTSEEIA 175
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 52.0 bits (119), Expect = 3e-07
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Frame = +2
Query: 221 VADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQM----SVIHPAAKMLVELSRAQD 388
+AD + +LGPRG + ++ G + NDG TI + + ++ + A ++ E++ +
Sbjct: 68 LADCVGLTLGPRGRNVVLDEF-GSPKVVNDGVTIARAIELPNAMENAGAALIREVASKTN 126
Query: 389 IEAGDGTTSVVVIAGAXLDSAXKLLXKGIHPTVISDGFQKALQLALQVVENMSTPVDLNN 568
AGDGTT+ ++A + + G +P + G K +Q ++ ++ + PV
Sbjct: 127 DSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKARPVK-GR 185
Query: 569 EDALLKAAATSLNSKVV 619
+D A+ ++ N ++
Sbjct: 186 DDIRAVASISAGNDDLI 202
>At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative similar to chaperonin containing TCP-1 (CCT)
epsilon subunit [Tetrahymena pyriformis] GI:15824416,
SP|P80316 T-complex protein 1, epsilon subunit
(TCP-1-epsilon) (CCT-epsilon) {Mus musculus}
Length = 142
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 155 QXYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDK 268
Q K + K D + +NI+A KAVA +R+SLGP+GM+K
Sbjct: 18 QDQKTRLKGIDAQKANISAGKAVARILRSSLGPKGMEK 55
>At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A
(PP2A) 65 kDa regulatory subunit, putative similar to
protein phosphatase 2A 65 kDa regulatory subunit
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 432 PAITTTDVVPSPASIS*ARDNSTNIFAAG*ITLICFKIVAPSLVI 298
P T TD+VP+ A + + I AAG +T C +I+ P L I
Sbjct: 274 PEPTRTDLVPAYARLLCDNEAEVRIAAAGKVTKFC-RILNPELAI 317
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,340,931
Number of Sequences: 28952
Number of extensions: 221962
Number of successful extensions: 539
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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