Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C23
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.72 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.72 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   0.95 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = -3

Query: 639 NFSILNDIAFSISCVDLVSLLISKYFNASDISNFSSILATCGGIICKLLL*MNTLFSVV 463
           N S  N +    S +DL +      FN S  S F + + T   + C +++ +  + +V+
Sbjct: 30  NISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGNVM 88



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 176 GHTMTPIVIFQAMIKNKTCNIRYLRVMVQEKTAFLL 69
           G+ M PIVIF+      + NI  + + V +    L+
Sbjct: 85  GNVMVPIVIFKTKDMRNSTNIFLVNLSVADLMVLLV 120


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = -3

Query: 639 NFSILNDIAFSISCVDLVSLLISKYFNASDISNFSSILATCGGIICKLLL*MNTLFSVV 463
           N S  N +    S +DL +      FN S  S F + + T   + C +++ +  + +V+
Sbjct: 30  NISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGNVM 88



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 176 GHTMTPIVIFQAMIKNKTCNIRYLRVMVQEKTAFLL 69
           G+ M PIVIF+      + NI  + + V +    L+
Sbjct: 85  GNVMVPIVIFKTKDMRNSTNIFLVNLSVADLMVLLV 120


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 575 FPSILMLLIFLTSHLYLPHVEVLYVNCC 492
           F  +++ ++F    L  P   ++YV CC
Sbjct: 136 FAGLIVFILFFAQGLTSPIFNLVYVYCC 163


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 4   KKSFIFSVINI*NLYLIEEMSFNK 75
           KKS IFS++N  +  LI  + F+K
Sbjct: 299 KKSTIFSILNTVSTLLIVMVQFDK 322


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 4   KKSFIFSVINI*NLYLIEEMSFNKN 78
           +K+ IFS+I    +Y +  + FN+N
Sbjct: 744 RKNLIFSLIANVAMYFVISVQFNQN 768


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 227 DVFKVFLPVYENKNLHNYPMHLINVTCFGD 316
           D++   L + +N  L +     +N+TC+ D
Sbjct: 351 DIYSDLLDLTDNNELFHLGSDEVNLTCWQD 380


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/24 (25%), Positives = 18/24 (75%)
 Frame = +2

Query: 332 WFIVYLVKNITKLYTNIVVQIKDS 403
           W +++L++ + ++ TN+V+++  S
Sbjct: 308 WIVLHLIRLMYQVTTNLVLKLLTS 331


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +2

Query: 116 YCTFYSLSLLERSQWVSLCDQINETILTLSKDY 214
           YC    L  L    W   CD + +    L++D+
Sbjct: 218 YCYINCLIYLIGGFWFMQCDVVGKVASQLAEDF 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,555
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)