BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_C23 (653 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 90 3e-19 SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 30 0.25 SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ... 29 0.44 SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 27 3.1 SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 3.1 SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe... 26 5.5 SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 25 9.5 SPAC19G12.12 |dlp1||decaprenyl diphosphate synthase subunit 2 Dl... 25 9.5 >SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|Schizosaccharomyces pombe|chr 1|||Manual Length = 590 Score = 89.8 bits (213), Expect = 3e-19 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 5/156 (3%) Frame = +2 Query: 194 LTLSKDYIWHRDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKLY 373 L K++IW + + Y+ K+ ++ +T FGD I+DEW+IV+L++ +K Sbjct: 52 LEYGKEHIWQNEELNLQRVEYQGKDC------ILGITNFGDCIDDEWYIVWLLREASKAV 105 Query: 374 TNIVVQIKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIPPHVASIDE----- 538 + V+I D DGEFLLIEAA LP W + + ++ RV+I+N + I+ P + + Sbjct: 106 KSAFVRIIDEDGEFLLIEAALSLPKWIDEDNSDYRVWIHNGEVIILRPEDEFLKKMNRCP 165 Query: 539 KLEISEALKYLEINKDTKSTHEIENAISLRIEKFSK 646 L +A+ + + ++ E+ ++IS R++KF K Sbjct: 166 PLTREQAIFQISSGSNLYTSREVNDSISQRLKKFPK 201 >SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1|||Manual Length = 881 Score = 30.3 bits (65), Expect = 0.25 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = +2 Query: 443 PSWANSNTTE---NRVFIYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIEN 613 P+W+ S + + F+Y+ I+ HV ++ +K ISE L + +T E N Sbjct: 717 PNWSRSKSAIILLSATFLYSLIAEILVEHVDTVLDKFAISEKFLGLTLFALVPNTTEFMN 776 Query: 614 AISLRIEK 637 AIS + + Sbjct: 777 AISFALNE 784 >SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 463 Score = 29.5 bits (63), Expect = 0.44 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Frame = +2 Query: 248 PVYENKNLHNYPMHLINVTCFGDNIEDEWFIV----YLVKNIT--KLYTNIVVQIKDSDG 409 P+ +KN++ Y + F N+ E F Y V+++ ++Y I S Sbjct: 362 PLPTDKNIYTYSQKTSSFVPFAGNLITELFFCSDSKYYVRHLVNQQVYPLIDCGYGPSGT 421 Query: 410 EFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIPPHV 523 L E YL S +N+T N + I+N P +V Sbjct: 422 SDGLCELQAYLNSPIRANSTSNGISIFNTECQARPTNV 459 >SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schizosaccharomyces pombe|chr 1|||Manual Length = 320 Score = 26.6 bits (56), Expect = 3.1 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +2 Query: 173 DQINETILTLSKDYIW--HRDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFI 340 + IN + SK++ + HR + K + VY +L +P+H T GD + W I Sbjct: 205 EYINPSQEAQSKNFTFKCHRQIQKDYDIVYPVNDLKFHPIHQTLATAGGDGVVAFWDI 262 >SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1367 Score = 26.6 bits (56), Expect = 3.1 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +3 Query: 180 SMKQS*LCQKITSGIEMFSKSFYQFMRIKIYTTILC 287 SMK L Q+ G+E K F+ +M IY +++C Sbjct: 1154 SMKNPSLYQRGILGLEWNGKRFWSYMLDGIYQSLVC 1189 >SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 551 Score = 25.8 bits (54), Expect = 5.5 Identities = 12/37 (32%), Positives = 25/37 (67%) Frame = +2 Query: 542 LEISEALKYLEINKDTKSTHEIENAISLRIEKFSKHL 652 +E+ E + E N++ KST ++ +++ IE+F+KH+ Sbjct: 68 IELIEIMSVGE-NENFKSTKQLVDSLHADIEQFTKHV 103 >SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosaccharomyces pombe|chr 1|||Manual Length = 703 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -1 Query: 128 KTCNIRYLRVMVQEKTAFLLKDI-SSIKYKFQMLITLNMKL 9 ++CN + +R+++ E L KDI S++ + I LN+ + Sbjct: 216 RSCNRQSMRLLLNECEPLLKKDILSNLPFSIVQSILLNLDI 256 >SPAC19G12.12 |dlp1||decaprenyl diphosphate synthase subunit 2 Dlp1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 294 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = +2 Query: 134 LSLLERSQWVSLCDQINETILTLSKDYIWHRDVFKVFLPVYENKN 268 LSL + W S+ + + + LS+D WH D+ K+ ++ N Sbjct: 19 LSLKKPGSWSSI---LLKAVGVLSRDSRWHSDLLKMLTEEMDSLN 60 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,670,779 Number of Sequences: 5004 Number of extensions: 57989 Number of successful extensions: 172 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 172 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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