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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C23
         (653 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S...    90   3e-19
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1...    30   0.25 
SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ...    29   0.44 
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi...    27   3.1  
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    27   3.1  
SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe...    26   5.5  
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar...    25   9.5  
SPAC19G12.12 |dlp1||decaprenyl diphosphate synthase subunit 2 Dl...    25   9.5  

>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
           Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 590

 Score = 89.8 bits (213), Expect = 3e-19
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
 Frame = +2

Query: 194 LTLSKDYIWHRDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKLY 373
           L   K++IW  +   +    Y+ K+       ++ +T FGD I+DEW+IV+L++  +K  
Sbjct: 52  LEYGKEHIWQNEELNLQRVEYQGKDC------ILGITNFGDCIDDEWYIVWLLREASKAV 105

Query: 374 TNIVVQIKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIPPHVASIDE----- 538
            +  V+I D DGEFLLIEAA  LP W + + ++ RV+I+N  + I+ P    + +     
Sbjct: 106 KSAFVRIIDEDGEFLLIEAALSLPKWIDEDNSDYRVWIHNGEVIILRPEDEFLKKMNRCP 165

Query: 539 KLEISEALKYLEINKDTKSTHEIENAISLRIEKFSK 646
            L   +A+  +    +  ++ E+ ++IS R++KF K
Sbjct: 166 PLTREQAIFQISSGSNLYTSREVNDSISQRLKKFPK 201


>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 881

 Score = 30.3 bits (65), Expect = 0.25
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +2

Query: 443 PSWANSNTTE---NRVFIYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIEN 613
           P+W+ S +     +  F+Y+    I+  HV ++ +K  ISE    L +     +T E  N
Sbjct: 717 PNWSRSKSAIILLSATFLYSLIAEILVEHVDTVLDKFAISEKFLGLTLFALVPNTTEFMN 776

Query: 614 AISLRIEK 637
           AIS  + +
Sbjct: 777 AISFALNE 784


>SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 463

 Score = 29.5 bits (63), Expect = 0.44
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
 Frame = +2

Query: 248 PVYENKNLHNYPMHLINVTCFGDNIEDEWFIV----YLVKNIT--KLYTNIVVQIKDSDG 409
           P+  +KN++ Y     +   F  N+  E F      Y V+++   ++Y  I      S  
Sbjct: 362 PLPTDKNIYTYSQKTSSFVPFAGNLITELFFCSDSKYYVRHLVNQQVYPLIDCGYGPSGT 421

Query: 410 EFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIPPHV 523
              L E   YL S   +N+T N + I+N      P +V
Sbjct: 422 SDGLCELQAYLNSPIRANSTSNGISIFNTECQARPTNV 459


>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
           Bub3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 320

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +2

Query: 173 DQINETILTLSKDYIW--HRDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFI 340
           + IN +    SK++ +  HR + K +  VY   +L  +P+H    T  GD +   W I
Sbjct: 205 EYINPSQEAQSKNFTFKCHRQIQKDYDIVYPVNDLKFHPIHQTLATAGGDGVVAFWDI 262


>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1367

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 180  SMKQS*LCQKITSGIEMFSKSFYQFMRIKIYTTILC 287
            SMK   L Q+   G+E   K F+ +M   IY +++C
Sbjct: 1154 SMKNPSLYQRGILGLEWNGKRFWSYMLDGIYQSLVC 1189


>SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 551

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +2

Query: 542 LEISEALKYLEINKDTKSTHEIENAISLRIEKFSKHL 652
           +E+ E +   E N++ KST ++ +++   IE+F+KH+
Sbjct: 68  IELIEIMSVGE-NENFKSTKQLVDSLHADIEQFTKHV 103


>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
           Pop2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 703

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 128 KTCNIRYLRVMVQEKTAFLLKDI-SSIKYKFQMLITLNMKL 9
           ++CN + +R+++ E    L KDI S++ +     I LN+ +
Sbjct: 216 RSCNRQSMRLLLNECEPLLKKDILSNLPFSIVQSILLNLDI 256


>SPAC19G12.12 |dlp1||decaprenyl diphosphate synthase subunit 2 Dlp1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 294

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 134 LSLLERSQWVSLCDQINETILTLSKDYIWHRDVFKVFLPVYENKN 268
           LSL +   W S+   + + +  LS+D  WH D+ K+     ++ N
Sbjct: 19  LSLKKPGSWSSI---LLKAVGVLSRDSRWHSDLLKMLTEEMDSLN 60


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,670,779
Number of Sequences: 5004
Number of extensions: 57989
Number of successful extensions: 172
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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