Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C23
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457407-1|CAG33688.1|  644|Homo sapiens HSGT1 protein.               105   1e-22
D88208-1|BAA75199.1|  644|Homo sapiens hSgt1p protein.                105   2e-22
BC000721-1|AAH00721.1|  644|Homo sapiens ecdysoneless homolog (D...   105   2e-22
AK128594-1|BAC87519.1|  130|Homo sapiens protein ( Homo sapiens ...    32   2.1  

>CR457407-1|CAG33688.1|  644|Homo sapiens HSGT1 protein.
          Length = 644

 Score =  105 bits (252), Expect = 1e-22
 Identities = 52/101 (51%), Positives = 64/101 (63%)
 Frame = +2

Query: 212 YIWHRDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKLYTNIVVQ 391
           YIW    F   L     K     P H+  VT FGDNIEDEWFIVY+VK ITK +  +V +
Sbjct: 53  YIWQNQPFN--LKYKPGKG--GVPAHMFGVTKFGDNIEDEWFIVYVVKQITKEFPELVAR 108

Query: 392 IKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIP 514
           I+D+DGEFLLIEAA++LP W +   + NRVF  +  L IIP
Sbjct: 109 IEDNDGEFLLIEAADFLPKWLDPENSTNRVFFCHGELCIIP 149


>D88208-1|BAA75199.1|  644|Homo sapiens hSgt1p protein.
          Length = 644

 Score =  105 bits (251), Expect = 2e-22
 Identities = 51/101 (50%), Positives = 64/101 (63%)
 Frame = +2

Query: 212 YIWHRDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKLYTNIVVQ 391
           YIW    F   L     K     P H+  VT FGDNIEDEWFIVY++K ITK +  +V +
Sbjct: 53  YIWQNQPFN--LKYKPGKG--GVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVAR 108

Query: 392 IKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIP 514
           I+D+DGEFLLIEAA++LP W +   + NRVF  +  L IIP
Sbjct: 109 IEDNDGEFLLIEAADFLPKWLDPENSTNRVFFCHGELCIIP 149


>BC000721-1|AAH00721.1|  644|Homo sapiens ecdysoneless homolog
           (Drosophila) protein.
          Length = 644

 Score =  105 bits (251), Expect = 2e-22
 Identities = 51/101 (50%), Positives = 64/101 (63%)
 Frame = +2

Query: 212 YIWHRDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKLYTNIVVQ 391
           YIW    F   L     K     P H+  VT FGDNIEDEWFIVY++K ITK +  +V +
Sbjct: 53  YIWQNQPFN--LKYKPGKG--GVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVAR 108

Query: 392 IKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIP 514
           I+D+DGEFLLIEAA++LP W +   + NRVF  +  L IIP
Sbjct: 109 IEDNDGEFLLIEAADFLPKWLDPENSTNRVFFCHGELCIIP 149


>AK128594-1|BAC87519.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46753 fis, clone TRACH3023203. ).
          Length = 130

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -3

Query: 408 PSLSLICTTMLVYSFVIFFTR*TMNHSSSILSPKHVTLIKCIG*LCRFL 262
           PSLSL C+  L+Y  V   TR    H   +  P  VT I  +  +C+FL
Sbjct: 57  PSLSLFCSVDLLYYIVCTHTR----HYFFLCLPSSVTCIHLLPLICKFL 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,178,072
Number of Sequences: 237096
Number of extensions: 1836072
Number of successful extensions: 7411
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7411
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)