Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_C23
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82056-6|CAB04857.1| 392|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23511-6|ABD63239.1| 116|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL032620-2|CAA21488.1| 392|Caenorhabditis elegans Hypothetical ... 29 2.2
U21319-6|AAC46676.3| 535|Caenorhabditis elegans Puf (pumilio/fb... 29 3.8
Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 5.0
U40061-1|AAA81148.2| 573|Caenorhabditis elegans Hypothetical pr... 28 5.0
U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 5.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 5.0
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 6.7
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 6.7
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 27 8.8
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 27 8.8
>U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical
protein C23H3.5 protein.
Length = 403
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 62 CLSIKMQFFLEPLHEDTVYCTFYSLSLLERSQWVSL 169
C +K + LE + E V C ++ LLE W++L
Sbjct: 138 CAYVKRVYLLERIRESCVKCADGAIGLLEIDHWINL 173
>Z82056-6|CAB04857.1| 392|Caenorhabditis elegans Hypothetical
protein T26H5.8 protein.
Length = 392
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 332 WFIVYLVKNITKLYTNIVVQIKDSDGEFLLIEAANYLPSWANSNTTE 472
W++ YL K+ K+Y +++ KD + +E Y P W T E
Sbjct: 340 WWLSYLAKSSAKVYYRDILETKDGVINDMKVEDF-YPPEWIKLRTNE 385
>U23511-6|ABD63239.1| 116|Caenorhabditis elegans Hypothetical
protein C32D5.14 protein.
Length = 116
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -1
Query: 134 KNKTCNIRYLRVMVQEKTAFLLKDISSIKYKFQMLITLNMK 12
++ CN + + +Q K DI+SIK++ ++LI LN +
Sbjct: 50 RSSLCNFIHKILKLQHKRRIRRSDINSIKFQTKILICLNFR 90
>AL032620-2|CAA21488.1| 392|Caenorhabditis elegans Hypothetical
protein T26H5.8 protein.
Length = 392
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 332 WFIVYLVKNITKLYTNIVVQIKDSDGEFLLIEAANYLPSWANSNTTE 472
W++ YL K+ K+Y +++ KD + +E Y P W T E
Sbjct: 340 WWLSYLAKSSAKVYYRDILETKDGVINDMKVEDF-YPPEWIKLRTNE 385
>U21319-6|AAC46676.3| 535|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 8 protein.
Length = 535
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 123 RFILYHCLKDHNGCHCVTKSMKQ 191
R +++ C+KD NG H V K++++
Sbjct: 305 RHVIHRCMKDQNGNHVVQKAIEK 327
>Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical
protein T27E7.4 protein.
Length = 350
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 606 ISCVDLVSLLISKYFNASDISNFSSILATCGGIICKLLL*MNTLFSVVFE 457
IS + LV + F + D S IL IIC + + + T+FS V++
Sbjct: 92 ISILVLVPFAVYYCFRSPDFSFLDKILLIPISIICAVFIYITTIFSQVYQ 141
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Frame = +2
Query: 338 IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484
+V +NIT LY+ ++ VQ E L ++A + + ++ T TEN +
Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037
Query: 485 IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637
Y N + + ++D E SEA+ + ++ ++S E ++ ++EK
Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088
>U40061-1|AAA81148.2| 573|Caenorhabditis elegans Hypothetical
protein ZK563.2 protein.
Length = 573
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 227 DVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKLYTNIVVQIKDSD 406
D ++ F+ V+ + P +I +T DN+ FI+ L+ IT + + +++S
Sbjct: 439 DHYRWFIVVFISTVFLIIPFTIIGLTLLPDNVIVIVFIIILIIAITCCF---ICVLQNSC 495
Query: 407 GEFL--LIEAANYLPSWANS 460
EFL ++ ++LP W S
Sbjct: 496 KEFLPKILHNWSFLPIWMRS 515
>U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical
protein F07F6.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 251 VYENKNLHNYPMHLINVTCFGDNIEDEWFI 340
+Y + NLH++ + N+ CF D+ D +F+
Sbjct: 380 LYLSSNLHHHEKIIDNLACFQDDCTDVYFL 409
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Frame = +2
Query: 338 IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484
+V +NIT LY+ ++ VQ E L ++A + + ++ T TEN +
Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037
Query: 485 IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637
Y N + + ++D E SEA+ + ++ ++S E ++ ++EK
Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Frame = +2
Query: 338 IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484
+V +NIT LY+ ++ VQ E L ++A + + ++ T TEN +
Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037
Query: 485 IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637
Y N + + ++D E SEA+ + ++ ++S E ++ ++EK
Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 503 HIIPPHVASIDEKLEISEALKYLEINK 583
HI+P A+I K+E S+ +K+++ +K
Sbjct: 932 HILPLRYATISHKIEFSDEIKFIDGSK 958
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 503 HIIPPHVASIDEKLEISEALKYLEINK 583
HI+P A+I K+E S+ +K+++ +K
Sbjct: 932 HILPLRYATISHKIEFSDEIKFIDGSK 958
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical
protein ZK856.1 protein.
Length = 765
Score = 27.5 bits (58), Expect = 8.8
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +2
Query: 386 VQIKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIP--PHVASIDEKLEISE- 556
V + D GE L+ TTE I N L+ + ++ D+KLE +
Sbjct: 169 VALNDRAGEDPLLVYRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQ 228
Query: 557 -ALKYLEINKDTKSTHEIENAISLRIEKF 640
A +YLE+N T H +E A+ +E F
Sbjct: 229 RAKRYLEMNSPTSGKH-MEKAVIALVESF 256
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 524 ASIDEKLEISEALKYLEINKDTKSTHEIENAISLR 628
+S E+LEI ++L+ +K K+ +IEN+I +R
Sbjct: 504 SSYSEELEICVFCEFLDKHKALKTKPKIENSIQMR 538
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = +2
Query: 224 RDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKL 370
+D+ ++L + N+N+ N P H I++ N+E++ ++Y + +I L
Sbjct: 304 KDLGVIYLNIVNNENIKNTPKHYIHI----KNLEND--VLYFISSIRYL 346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,548,747
Number of Sequences: 27780
Number of extensions: 320218
Number of successful extensions: 802
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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