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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C23
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80453-1|AAK31444.1|  403|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z82056-6|CAB04857.1|  392|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U23511-6|ABD63239.1|  116|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AL032620-2|CAA21488.1|  392|Caenorhabditis elegans Hypothetical ...    29   2.2  
U21319-6|AAC46676.3|  535|Caenorhabditis elegans Puf (pumilio/fb...    29   3.8  
Z82284-3|CAB05293.1|  350|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p...    28   5.0  
U40061-1|AAA81148.2|  573|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U23486-7|AAC46775.1|  428|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha...    28   5.0  
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical...    28   6.7  
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical...    28   6.7  
Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical...    27   8.8  

>U80453-1|AAK31444.1|  403|Caenorhabditis elegans Hypothetical
           protein C23H3.5 protein.
          Length = 403

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 62  CLSIKMQFFLEPLHEDTVYCTFYSLSLLERSQWVSL 169
           C  +K  + LE + E  V C   ++ LLE   W++L
Sbjct: 138 CAYVKRVYLLERIRESCVKCADGAIGLLEIDHWINL 173


>Z82056-6|CAB04857.1|  392|Caenorhabditis elegans Hypothetical
           protein T26H5.8 protein.
          Length = 392

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 332 WFIVYLVKNITKLYTNIVVQIKDSDGEFLLIEAANYLPSWANSNTTE 472
           W++ YL K+  K+Y   +++ KD     + +E   Y P W    T E
Sbjct: 340 WWLSYLAKSSAKVYYRDILETKDGVINDMKVEDF-YPPEWIKLRTNE 385


>U23511-6|ABD63239.1|  116|Caenorhabditis elegans Hypothetical
           protein C32D5.14 protein.
          Length = 116

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 134 KNKTCNIRYLRVMVQEKTAFLLKDISSIKYKFQMLITLNMK 12
           ++  CN  +  + +Q K      DI+SIK++ ++LI LN +
Sbjct: 50  RSSLCNFIHKILKLQHKRRIRRSDINSIKFQTKILICLNFR 90


>AL032620-2|CAA21488.1|  392|Caenorhabditis elegans Hypothetical
           protein T26H5.8 protein.
          Length = 392

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 332 WFIVYLVKNITKLYTNIVVQIKDSDGEFLLIEAANYLPSWANSNTTE 472
           W++ YL K+  K+Y   +++ KD     + +E   Y P W    T E
Sbjct: 340 WWLSYLAKSSAKVYYRDILETKDGVINDMKVEDF-YPPEWIKLRTNE 385


>U21319-6|AAC46676.3|  535|Caenorhabditis elegans Puf (pumilio/fbf)
           domain-containingprotein 8 protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +3

Query: 123 RFILYHCLKDHNGCHCVTKSMKQ 191
           R +++ C+KD NG H V K++++
Sbjct: 305 RHVIHRCMKDQNGNHVVQKAIEK 327


>Z82284-3|CAB05293.1|  350|Caenorhabditis elegans Hypothetical
           protein T27E7.4 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 606 ISCVDLVSLLISKYFNASDISNFSSILATCGGIICKLLL*MNTLFSVVFE 457
           IS + LV   +   F + D S    IL     IIC + + + T+FS V++
Sbjct: 92  ISILVLVPFAVYYCFRSPDFSFLDKILLIPISIICAVFIYITTIFSQVYQ 141


>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
            protein T22A3.8 protein.
          Length = 3102

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
 Frame = +2

Query: 338  IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484
            +V   +NIT LY+ ++       VQ      E L ++A   +  + ++ T TEN +    
Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037

Query: 485  IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637
             Y N +  +     ++D   E SEA+  +  ++ ++S    E ++  ++EK
Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088


>U40061-1|AAA81148.2|  573|Caenorhabditis elegans Hypothetical
           protein ZK563.2 protein.
          Length = 573

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = +2

Query: 227 DVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKLYTNIVVQIKDSD 406
           D ++ F+ V+ +      P  +I +T   DN+    FI+ L+  IT  +   +  +++S 
Sbjct: 439 DHYRWFIVVFISTVFLIIPFTIIGLTLLPDNVIVIVFIIILIIAITCCF---ICVLQNSC 495

Query: 407 GEFL--LIEAANYLPSWANS 460
            EFL  ++   ++LP W  S
Sbjct: 496 KEFLPKILHNWSFLPIWMRS 515


>U23486-7|AAC46775.1|  428|Caenorhabditis elegans Hypothetical
           protein F07F6.1 protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 251 VYENKNLHNYPMHLINVTCFGDNIEDEWFI 340
           +Y + NLH++   + N+ CF D+  D +F+
Sbjct: 380 LYLSSNLHHHEKIIDNLACFQDDCTDVYFL 409


>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
            protein T22A3.8 protein.
          Length = 3102

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
 Frame = +2

Query: 338  IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484
            +V   +NIT LY+ ++       VQ      E L ++A   +  + ++ T TEN +    
Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037

Query: 485  IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637
             Y N +  +     ++D   E SEA+  +  ++ ++S    E ++  ++EK
Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088


>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3102

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
 Frame = +2

Query: 338  IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484
            +V   +NIT LY+ ++       VQ      E L ++A   +  + ++ T TEN +    
Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037

Query: 485  IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637
             Y N +  +     ++D   E SEA+  +  ++ ++S    E ++  ++EK
Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088


>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
            twisted, animalsroll when moving protein 3, isoform b
            protein.
          Length = 1250

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 503  HIIPPHVASIDEKLEISEALKYLEINK 583
            HI+P   A+I  K+E S+ +K+++ +K
Sbjct: 932  HILPLRYATISHKIEFSDEIKFIDGSK 958


>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
            twisted, animalsroll when moving protein 3, isoform a
            protein.
          Length = 2456

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 503  HIIPPHVASIDEKLEISEALKYLEINK 583
            HI+P   A+I  K+E S+ +K+++ +K
Sbjct: 932  HILPLRYATISHKIEFSDEIKFIDGSK 958


>Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical
           protein ZK856.1 protein.
          Length = 765

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
 Frame = +2

Query: 386 VQIKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIP--PHVASIDEKLEISE- 556
           V + D  GE  L+             TTE    I  N L+ +    ++   D+KLE  + 
Sbjct: 169 VALNDRAGEDPLLVYRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQ 228

Query: 557 -ALKYLEINKDTKSTHEIENAISLRIEKF 640
            A +YLE+N  T   H +E A+   +E F
Sbjct: 229 RAKRYLEMNSPTSGKH-MEKAVIALVESF 256


>U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical
           protein F42C5.4 protein.
          Length = 712

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +2

Query: 524 ASIDEKLEISEALKYLEINKDTKSTHEIENAISLR 628
           +S  E+LEI    ++L+ +K  K+  +IEN+I +R
Sbjct: 504 SSYSEELEICVFCEFLDKHKALKTKPKIENSIQMR 538


>AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical
           protein Y26D4A.13 protein.
          Length = 758

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/49 (26%), Positives = 29/49 (59%)
 Frame = +2

Query: 224 RDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKL 370
           +D+  ++L +  N+N+ N P H I++     N+E++  ++Y + +I  L
Sbjct: 304 KDLGVIYLNIVNNENIKNTPKHYIHI----KNLEND--VLYFISSIRYL 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,548,747
Number of Sequences: 27780
Number of extensions: 320218
Number of successful extensions: 802
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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