BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_C23 (653 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical pr... 30 1.6 Z82056-6|CAB04857.1| 392|Caenorhabditis elegans Hypothetical pr... 29 2.2 U23511-6|ABD63239.1| 116|Caenorhabditis elegans Hypothetical pr... 29 2.2 AL032620-2|CAA21488.1| 392|Caenorhabditis elegans Hypothetical ... 29 2.2 U21319-6|AAC46676.3| 535|Caenorhabditis elegans Puf (pumilio/fb... 29 3.8 Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical pr... 28 5.0 Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 5.0 U40061-1|AAA81148.2| 573|Caenorhabditis elegans Hypothetical pr... 28 5.0 U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical pr... 28 5.0 AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 5.0 AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 5.0 U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 6.7 U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 6.7 Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 27 8.8 U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 27 8.8 AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 27 8.8 >U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical protein C23H3.5 protein. Length = 403 Score = 29.9 bits (64), Expect = 1.6 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +2 Query: 62 CLSIKMQFFLEPLHEDTVYCTFYSLSLLERSQWVSL 169 C +K + LE + E V C ++ LLE W++L Sbjct: 138 CAYVKRVYLLERIRESCVKCADGAIGLLEIDHWINL 173 >Z82056-6|CAB04857.1| 392|Caenorhabditis elegans Hypothetical protein T26H5.8 protein. Length = 392 Score = 29.5 bits (63), Expect = 2.2 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 332 WFIVYLVKNITKLYTNIVVQIKDSDGEFLLIEAANYLPSWANSNTTE 472 W++ YL K+ K+Y +++ KD + +E Y P W T E Sbjct: 340 WWLSYLAKSSAKVYYRDILETKDGVINDMKVEDF-YPPEWIKLRTNE 385 >U23511-6|ABD63239.1| 116|Caenorhabditis elegans Hypothetical protein C32D5.14 protein. Length = 116 Score = 29.5 bits (63), Expect = 2.2 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -1 Query: 134 KNKTCNIRYLRVMVQEKTAFLLKDISSIKYKFQMLITLNMK 12 ++ CN + + +Q K DI+SIK++ ++LI LN + Sbjct: 50 RSSLCNFIHKILKLQHKRRIRRSDINSIKFQTKILICLNFR 90 >AL032620-2|CAA21488.1| 392|Caenorhabditis elegans Hypothetical protein T26H5.8 protein. Length = 392 Score = 29.5 bits (63), Expect = 2.2 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 332 WFIVYLVKNITKLYTNIVVQIKDSDGEFLLIEAANYLPSWANSNTTE 472 W++ YL K+ K+Y +++ KD + +E Y P W T E Sbjct: 340 WWLSYLAKSSAKVYYRDILETKDGVINDMKVEDF-YPPEWIKLRTNE 385 >U21319-6|AAC46676.3| 535|Caenorhabditis elegans Puf (pumilio/fbf) domain-containingprotein 8 protein. Length = 535 Score = 28.7 bits (61), Expect = 3.8 Identities = 9/23 (39%), Positives = 17/23 (73%) Frame = +3 Query: 123 RFILYHCLKDHNGCHCVTKSMKQ 191 R +++ C+KD NG H V K++++ Sbjct: 305 RHVIHRCMKDQNGNHVVQKAIEK 327 >Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical protein T27E7.4 protein. Length = 350 Score = 28.3 bits (60), Expect = 5.0 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -3 Query: 606 ISCVDLVSLLISKYFNASDISNFSSILATCGGIICKLLL*MNTLFSVVFE 457 IS + LV + F + D S IL IIC + + + T+FS V++ Sbjct: 92 ISILVLVPFAVYYCFRSPDFSFLDKILLIPISIICAVFIYITTIFSQVYQ 141 >Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical protein T22A3.8 protein. Length = 3102 Score = 28.3 bits (60), Expect = 5.0 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Frame = +2 Query: 338 IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484 +V +NIT LY+ ++ VQ E L ++A + + ++ T TEN + Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037 Query: 485 IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637 Y N + + ++D E SEA+ + ++ ++S E ++ ++EK Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088 >U40061-1|AAA81148.2| 573|Caenorhabditis elegans Hypothetical protein ZK563.2 protein. Length = 573 Score = 28.3 bits (60), Expect = 5.0 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Frame = +2 Query: 227 DVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKLYTNIVVQIKDSD 406 D ++ F+ V+ + P +I +T DN+ FI+ L+ IT + + +++S Sbjct: 439 DHYRWFIVVFISTVFLIIPFTIIGLTLLPDNVIVIVFIIILIIAITCCF---ICVLQNSC 495 Query: 407 GEFL--LIEAANYLPSWANS 460 EFL ++ ++LP W S Sbjct: 496 KEFLPKILHNWSFLPIWMRS 515 >U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical protein F07F6.1 protein. Length = 428 Score = 28.3 bits (60), Expect = 5.0 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +2 Query: 251 VYENKNLHNYPMHLINVTCFGDNIEDEWFI 340 +Y + NLH++ + N+ CF D+ D +F+ Sbjct: 380 LYLSSNLHHHEKIIDNLACFQDDCTDVYFL 409 >AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical protein T22A3.8 protein. Length = 3102 Score = 28.3 bits (60), Expect = 5.0 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Frame = +2 Query: 338 IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484 +V +NIT LY+ ++ VQ E L ++A + + ++ T TEN + Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037 Query: 485 IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637 Y N + + ++D E SEA+ + ++ ++S E ++ ++EK Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088 >AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha chain protein. Length = 3102 Score = 28.3 bits (60), Expect = 5.0 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Frame = +2 Query: 338 IVYLVKNITKLYTNIV-------VQIKDSDGEFLLIEAANYLPSWANSNT-TENRV---F 484 +V +NIT LY+ ++ VQ E L ++A + + ++ T TEN + Sbjct: 1978 LVEQCQNITLLYSQLIDEYDEEYVQTAGRHAEKLEVQAQKIVDRFVDTRTETENPLKASH 2037 Query: 485 IYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEK 637 Y N + + ++D E SEA+ + ++ ++S E ++ ++EK Sbjct: 2038 AYENIVEALKNATEAVDSAAEASEAVSKMLGSEGSESGDANEESLRSQLEK 2088 >U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically twisted, animalsroll when moving protein 3, isoform b protein. Length = 1250 Score = 27.9 bits (59), Expect = 6.7 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = +2 Query: 503 HIIPPHVASIDEKLEISEALKYLEINK 583 HI+P A+I K+E S+ +K+++ +K Sbjct: 932 HILPLRYATISHKIEFSDEIKFIDGSK 958 >U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically twisted, animalsroll when moving protein 3, isoform a protein. Length = 2456 Score = 27.9 bits (59), Expect = 6.7 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = +2 Query: 503 HIIPPHVASIDEKLEISEALKYLEINK 583 HI+P A+I K+E S+ +K+++ +K Sbjct: 932 HILPLRYATISHKIEFSDEIKFIDGSK 958 >Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical protein ZK856.1 protein. Length = 765 Score = 27.5 bits (58), Expect = 8.8 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 4/89 (4%) Frame = +2 Query: 386 VQIKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIP--PHVASIDEKLEISE- 556 V + D GE L+ TTE I N L+ + ++ D+KLE + Sbjct: 169 VALNDRAGEDPLLVYRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQ 228 Query: 557 -ALKYLEINKDTKSTHEIENAISLRIEKF 640 A +YLE+N T H +E A+ +E F Sbjct: 229 RAKRYLEMNSPTSGKH-MEKAVIALVESF 256 >U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical protein F42C5.4 protein. Length = 712 Score = 27.5 bits (58), Expect = 8.8 Identities = 13/35 (37%), Positives = 23/35 (65%) Frame = +2 Query: 524 ASIDEKLEISEALKYLEINKDTKSTHEIENAISLR 628 +S E+LEI ++L+ +K K+ +IEN+I +R Sbjct: 504 SSYSEELEICVFCEFLDKHKALKTKPKIENSIQMR 538 >AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical protein Y26D4A.13 protein. Length = 758 Score = 27.5 bits (58), Expect = 8.8 Identities = 13/49 (26%), Positives = 29/49 (59%) Frame = +2 Query: 224 RDVFKVFLPVYENKNLHNYPMHLINVTCFGDNIEDEWFIVYLVKNITKL 370 +D+ ++L + N+N+ N P H I++ N+E++ ++Y + +I L Sbjct: 304 KDLGVIYLNIVNNENIKNTPKHYIHI----KNLEND--VLYFISSIRYL 346 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,548,747 Number of Sequences: 27780 Number of extensions: 320218 Number of successful extensions: 802 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 786 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 802 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1455289764 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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