Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C22
         (415 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep: CG90...    57   1e-07
UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1; ...    33   1.8  
UniRef50_A5AIG1 Cluster: Putative uncharacterized protein; n=1; ...    31   7.1  
UniRef50_O29373 Cluster: Ribose ABC transporter, permease protei...    31   9.3  

>UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep:
           CG9034-PA - Drosophila melanogaster (Fruit fly)
          Length = 77

 Score = 57.2 bits (132), Expect = 1e-07
 Identities = 26/60 (43%), Positives = 30/60 (50%)
 Frame = +3

Query: 129 RXWNEIPEIFASTXXXXXXXXXXXXXAYNYVKNDGDNRRYKGTYVVMRPDDPRVKLIRKE 308
           R WNEIP+I   +               NY   DGDNRRYK  YVV R DDPR   +R +
Sbjct: 15  RAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVVYRHDDPRALKVRND 74


>UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 418

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +2

Query: 203 WSIQLREERWRQ*KVQGYLCGDEAGRPKSEAYTQGVNLKLNILPVLFV 346
           W+I    E W + KV  +  GDE GR   EAY Q   LKL     LF+
Sbjct: 34  WTINFDYEAWAKDKV--FHVGDELGRDAEEAYIQRTPLKLQ-FETLFI 78


>UniRef50_A5AIG1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 348

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = +2

Query: 131 GMERDP*NFCLNRLRS-CWYWSGCSWSIQLREER 229
           GM   P  FC  R    CW WS C W   L  +R
Sbjct: 228 GMTNAPTTFCTVRSPGICWLWSWCKWKRHLMGKR 261


>UniRef50_O29373 Cluster: Ribose ABC transporter, permease protein;
           n=2; cellular organisms|Rep: Ribose ABC transporter,
           permease protein - Archaeoglobus fulgidus
          Length = 310

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -3

Query: 371 ILHNIWI*EQTTQAIYLVSGL-LLAYKLHSWVVRPHHHIGTLVPSIVSIVL 222
           ++ + W+ ++     YL  GL +L++KL +  +   +H+  +VP +V+IV+
Sbjct: 232 VIFSGWMPQRAVFGAYLFGGLDVLSFKLQATGIEVSYHLMKMVPYVVTIVV 282


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,437,856
Number of Sequences: 1657284
Number of extensions: 6263123
Number of successful extensions: 13533
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13533
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)