Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C22
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   3.3  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   3.3  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   5.8  

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 296 KLHSWVVRPHHHIGTLVPSIVSIVLHV 216
           K ++W  R     GT   S+VSIVL V
Sbjct: 6   KNYTWQQRSFPSTGTSSQSVVSIVLRV 32


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 296 KLHSWVVRPHHHIGTLVPSIVSIVLHV 216
           K ++W  R     GT   S+VSIVL V
Sbjct: 6   KNYTWQQRSFPSTGTSSQSVVSIVLRV 32


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 139 FHXLLN*LSKRF---SRSRSHLYMLVGPTFNQQNFSIFSAQAHTTRLV 5
           FH +    S+ F   ++S S LY+L+  T + Q+F +   Q    + +
Sbjct: 148 FHHIKQVRSQNFVGKTQSYSKLYLLLKATLSAQSFRVQKKQTKQNKKI 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,967
Number of Sequences: 2352
Number of extensions: 7480
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)