Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C22
         (415 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110477-20|CAB76740.3|  728|Caenorhabditis elegans Hypothetical...    27   5.4  
U29082-7|AAA68404.3|  319|Caenorhabditis elegans Hypothetical pr...    26   9.4  

>AL110477-20|CAB76740.3|  728|Caenorhabditis elegans Hypothetical
           protein Y113G7B.18 protein.
          Length = 728

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 197 CSWSIQLREER--WRQ*KVQGYLCGD 268
           C +  +LRE R  WR  KV  Y+CGD
Sbjct: 274 CGFLRELREMREIWRVRKVGDYICGD 299


>U29082-7|AAA68404.3|  319|Caenorhabditis elegans Hypothetical
           protein C14F5.4 protein.
          Length = 319

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = -2

Query: 309 TPCV*ASLLGRPASSPHRYPCTFYCLHRSSRNCMLQEHPD 190
           T  + AS L +        P T   LHRS R C    HPD
Sbjct: 36  TELITASELMQKCREKKPVPATLEELHRSQRLCQSAFHPD 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,198,352
Number of Sequences: 27780
Number of extensions: 145675
Number of successful extensions: 334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)