BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_C21 (651 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_1027 - 8873582-8876275 29 3.2 06_01_0832 - 6269249-6271794,6272083-6272176 29 3.2 04_04_0955 + 29640612-29643305 29 3.2 04_04_0209 + 23607749-23607893,23607990-23608043,23608156-236084... 29 3.2 05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 28 5.6 03_01_0034 + 318432-318825,318902-319851 28 5.6 01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 28 5.6 01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 28 5.6 11_01_0027 - 199196-199396,199514-199651,200207-200284,200419-20... 28 7.4 >07_01_1027 - 8873582-8876275 Length = 897 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 462 LKLKDCFVLMRFRSASIRTVSDTLPYH 542 LK+K+C ++ RF++ R + TLP H Sbjct: 864 LKVKECDIINRFQAMKERRIKATLPSH 890 >06_01_0832 - 6269249-6271794,6272083-6272176 Length = 879 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 462 LKLKDCFVLMRFRSASIRTVSDTLPYH 542 LK+K+C ++ RF++ R + TLP H Sbjct: 846 LKVKECDIINRFQAMKERRIKATLPSH 872 >04_04_0955 + 29640612-29643305 Length = 897 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 462 LKLKDCFVLMRFRSASIRTVSDTLPYH 542 LK+K+C ++ RF++ R + TLP H Sbjct: 864 LKVKECDIINRFQAMKERRIKATLPSH 890 >04_04_0209 + 23607749-23607893,23607990-23608043,23608156-23608433, 23609524-23609894,23610033-23610096,23610472-23610603 Length = 347 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +1 Query: 220 MLRRSLKPSNNNHNGPVHRAVNFAASLKISPVILW 324 + RR ++PSNN N P AV A+ + SP+ W Sbjct: 111 LARRFIRPSNNKENVPPVWAVKATATKRRSPLPDW 145 >05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190, 20062179-20062849 Length = 624 Score = 28.3 bits (60), Expect = 5.6 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 277 LDEQVHYDYC*MVLDFSVTSYSDLNHNI 194 LD + YD C L + S+ DLNH I Sbjct: 382 LDNEALYDICFRTLKLTTPSFGDLNHLI 409 >03_01_0034 + 318432-318825,318902-319851 Length = 447 Score = 28.3 bits (60), Expect = 5.6 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 277 LDEQVHYDYC*MVLDFSVTSYSDLNHNI 194 LD + YD C L + S+ DLNH I Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLI 229 >01_06_1060 + 34162161-34162554,34162613-34162675,34163262-34163531, 34163944-34164623 Length = 468 Score = 28.3 bits (60), Expect = 5.6 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 277 LDEQVHYDYC*MVLDFSVTSYSDLNHNI 194 LD + YD C L + S+ DLNH I Sbjct: 223 LDNEALYDICFRTLKLTTPSFGDLNHLI 250 >01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 Length = 447 Score = 28.3 bits (60), Expect = 5.6 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 277 LDEQVHYDYC*MVLDFSVTSYSDLNHNI 194 LD + YD C L + S+ DLNH I Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLI 229 >11_01_0027 - 199196-199396,199514-199651,200207-200284,200419-200604, 200754-200846,201665-201731,202374-202675 Length = 354 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +1 Query: 289 AASLKISPVILWSIQWASM*KLFYRLRMVQPHWRT--RQREDNKWPLERNDLKSPRT 453 A+S+ ++ W + WA+ +F+ L ++ WR R N +ER++ P T Sbjct: 69 ASSIDLAWAWAWPLYWAAQGTMFWALFVLGHDWRISHRTHHQNHGHIERDESWHPIT 125 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,192,510 Number of Sequences: 37544 Number of extensions: 310383 Number of successful extensions: 702 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 687 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 702 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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