Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_C20
(650 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 23 1.6
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 23 1.6
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 23 2.9
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 23 2.9
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 8.8
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 21 8.8
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 8.8
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 23.4 bits (48), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP----ALFARSLLQG--VFSDSTISKK 386
DT ENV K+ + +GI P ++FA L+ SD I K+
Sbjct: 401 DTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 444
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 21 DTIENVKAKIQDKEGIPP 38
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 97 DTIENVKAKIQDKEGIPP 114
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 173 DTIENVKAKIQDKEGIPP 190
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 249 DTIENVKAKIQDKEGIPP 266
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 325 DTIENVKAKIQDKEGIPP 342
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 477 DTIENVKAKIQDKEGIPP 494
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 553 DTIENVKAKIQDKEGIPP 570
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 629 DTIENVKAKIQDKEGIPP 646
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 23.4 bits (48), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP----ALFARSLLQG--VFSDSTISKK 386
DT ENV K+ + +GI P ++FA L+ SD I K+
Sbjct: 69 DTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 21 DTIENVKAKIQDKEGIPP 38
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 273 DTKENVILKLSESQGISP 326
DT ENV K+ + +GI P
Sbjct: 21 DTIENVKAKIQDKEGIPP 38
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.0 bits (42), Expect = 8.8
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 282 ENVILKLSESQGISPALFARSLLQGVFSDSTI 377
+N K+ ++ G L + + QG+++ STI
Sbjct: 277 QNKRAKIKKASGTKNPLALQLMAQGLYNHSTI 308
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/28 (25%), Positives = 14/28 (50%)
Frame = -3
Query: 636 HQQRWVHPI*SQEFYHTLLNVAHFHQKR 553
H+ W H + ++ H + + H HQ +
Sbjct: 91 HRPNWWHELETKFNPHHEIKLQHLHQSK 118
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 98 HSLEKWKTNLKE 133
HSL++W LKE
Sbjct: 411 HSLDEWDDTLKE 422
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,758
Number of Sequences: 336
Number of extensions: 2271
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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