Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C20
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0510 + 3841630-3844089,3844235-3844358,3844641-3844786,384...    29   3.2  
12_01_0120 + 912312-912615,913145-913371,913507-913754,914293-91...    29   4.2  
11_01_0429 - 3288081-3288781,3290038-3290293                           29   4.2  
11_01_0112 + 875447-875490,875854-876359,876750-876976,877112-87...    29   4.2  
07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,127...    27   9.8  
02_05_1278 - 35416451-35416458,35416777-35416969,35416970-354170...    27   9.8  
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121...    27   9.8  

>03_01_0510 + 3841630-3844089,3844235-3844358,3844641-3844786,
            3844861-3844958,3845313-3845502
          Length = 1005

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +3

Query: 207  TIENPLXISSKYQELYEVAMRDDTKENVILKLSESQGISPALFARSLLQGVFSDSTISKK 386
            +I + L +SSK+QE++++    +  ++ I     S GI    F       +  +S   K 
Sbjct: 853  SIAHSLFLSSKHQEIWDITSSLEVHKSEIADWELSAGIYIDFF-------ILRNSMQEKS 905

Query: 387  YIKDTTLIDNKDLAYQVFMGIMNDN 461
             + D   ++ K+ +   F G +ND+
Sbjct: 906  TMDDPDQLEKKNESCSTFFGRLNDS 930


>12_01_0120 +
           912312-912615,913145-913371,913507-913754,914293-914656,
           914758-915154,915671-915693,916645-916987,917513-917532,
           918418-918527,919484-920255
          Length = 935

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 375 ISKKYIKDTTLIDNKDLAYQVFMGIMNDNQYGPYADVTKQ 494
           ISKKY  D++   NKDL + +  G    ++ GP+A  T +
Sbjct: 284 ISKKYEHDSSTSVNKDLLHSIIQG----SKDGPFASCTPE 319


>11_01_0429 - 3288081-3288781,3290038-3290293
          Length = 318

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 643 PKPSTAMGTSNLKSGVLSYPL 581
           P+PSTA G S+  SG  S+PL
Sbjct: 244 PRPSTAAGASSSSSGQSSFPL 264


>11_01_0112 +
           875447-875490,875854-876359,876750-876976,877112-877237,
           877313-877359,877888-878251,878396-878779
          Length = 565

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 375 ISKKYIKDTTLIDNKDLAYQVFMGIMNDNQYGPYADVTKQ 494
           ISKKY  D++   NKDL + +  G    ++ GP+A  T +
Sbjct: 341 ISKKYEHDSSTSVNKDLLHSIIQG----SKDGPFASCTPE 376


>07_01_0181 +
           1274177-1274200,1274335-1276161,1276519-1277448,
           1278314-1278367
          Length = 944

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 59  NTMQ*WKILLNFHHSLEKWKTNLKE 133
           N+++ WK+L N  H LE  K  +KE
Sbjct: 711 NSLEIWKLLRNKEHVLEMLKLKIKE 735


>02_05_1278 -
           35416451-35416458,35416777-35416969,35416970-35417056,
           35417851-35417892,35418542-35418617,35418954-35421589
          Length = 1013

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 49  KIEEYNAIVEDFTKLSSFTRKME 117
           K+  YNA++ DFTK    T+  E
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKE 855


>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
            1216413-1216738,1216860-1217013,1217377-1217438,
            1218078-1218133,1219456-1221279,1221775-1222698,
            1222855-1222866
          Length = 1242

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 59   NTMQ*WKILLNFHHSLEKWKTNLKE 133
            N+++ WK+L N  H LE  K  +KE
Sbjct: 1025 NSLEIWKLLRNKEHVLEMLKLKIKE 1049


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,218,906
Number of Sequences: 37544
Number of extensions: 199032
Number of successful extensions: 404
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)