Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_C19
(401 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 220 8e-59
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 220 8e-59
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 220 8e-59
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 118 3e-28
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 116 1e-27
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 73 2e-14
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 52 3e-08
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 42 4e-05
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 42 5e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 42 5e-05
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 40 1e-04
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.15
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.20
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 25 0.33
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 0.47
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 1.1
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 1.4
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 2.5
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 3.3
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 4.4
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 4.4
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 25 5.8
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.8
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 7.7
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 24 7.7
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 220 bits (537), Expect = 8e-59
Identities = 101/108 (93%), Positives = 104/108 (96%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQ
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ 108
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 220 bits (537), Expect = 8e-59
Identities = 101/108 (93%), Positives = 104/108 (96%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQ
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ 108
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 220 bits (537), Expect = 8e-59
Identities = 101/108 (93%), Positives = 104/108 (96%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQ
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ 108
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 118 bits (284), Expect = 3e-28
Identities = 52/108 (48%), Positives = 74/108 (68%)
Frame = +2
Query: 77 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 256
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 257 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQG*XG 400
ERE+G T+++ FET +++DAPGH+ ++ NMI G SQ G
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIG 343
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 116 bits (280), Expect = 1e-27
Identities = 53/103 (51%), Positives = 70/103 (67%)
Frame = +2
Query: 77 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 256
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 257 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 385
ER RG+T+D+A FE+ K I DAPGHRDFI MI G S
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGAS 277
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 72.5 bits (170), Expect = 2e-14
Identities = 42/105 (40%), Positives = 58/105 (55%)
Frame = +2
Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 385
E+ RGITI A ++ET+ + +D PGH D+IKNMITG +
Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 52.0 bits (119), Expect = 3e-08
Identities = 32/90 (35%), Positives = 45/90 (50%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDF 358
RGITI+ A F + +ID PGH DF
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADF 106
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 41.9 bits (94), Expect = 4e-05
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 269 RGITIDI----ALWKFETSKYYVTIIDAPGHRDF 358
RGIT+ ++ + Y + +ID PGH DF
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDF 137
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 41.5 bits (93), Expect = 5e-05
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 235
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 358
+ L AE D+ + + + V +ID+PGH DF
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDF 111
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 41.5 bits (93), Expect = 5e-05
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 235
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 358
+ L AE D+ + + + V +ID+PGH DF
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDF 111
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 40.3 bits (90), Expect = 1e-04
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 269 RGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDF 358
+GITI A W+ FE S Y + IID PGH DF
Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDF 158
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 245 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 367
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.20
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 282 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 154
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 25.0 bits (52), Expect(2) = 0.33
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 212 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDF 358
GK + A+ + + GIT I + F+ ++T +D PGH F
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAF 233
Score = 22.2 bits (45), Expect(2) = 0.33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 92 IVVIGHVDSGKST 130
+ ++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 28.3 bits (60), Expect = 0.47
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 259
N ++ HVD GK+T L+ G I + T+ + E+ +G + K A
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74
Query: 260 ERERGITIDIALWKFETSKYYVTIIDAPGHRDF 358
I K Y + +ID+PGH DF
Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDF 107
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.1 bits (57), Expect = 1.1
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +2
Query: 98 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 271
++GHVD+GK+ +L + +++ E Q++G F + K K ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541
Query: 272 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 385
G K + + + IID PGH F GTS
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTS 571
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 1.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 306 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 175
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 2.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 272 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 174
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 251 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 123
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 4.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 59 PKMGKEKTHINIVVIGHVDSGKST 130
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 4.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 206 PGPPSRTSRWYVCQYHHIC 150
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 24.6 bits (51), Expect = 5.8
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 5 SCLESISDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLI 148
S +IS++ +SL S K K K+ + + VIG+ + GKS+ L+
Sbjct: 245 SASSTISNLLKSLKSYSAKK--KLKSSLTVGVIGYPNVGKSSVINALV 290
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 5.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 376 CDHVLDEISVSRSINDGNIVLASFEL 299
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.2 bits (50), Expect = 7.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 92 IVVIGHVDSGKSTTTGHLIYKC 157
IVV+G SGKST + +C
Sbjct: 115 IVVVGETGSGKSTQIPQFLNEC 136
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 7.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 95 VVIGHVDSGKSTTTGHLIYKCG 160
+V+GH GK+T +Y+ G
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAG 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,550,360
Number of Sequences: 5004
Number of extensions: 27991
Number of successful extensions: 111
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 136158338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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