Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_C19
(401 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 128 1e-30
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 97 5e-21
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 84 4e-17
SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09) 50 5e-07
SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0) 46 9e-06
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.009
SB_1541| Best HMM Match : MMR_HSR1 (HMM E-Value=0.12) 34 0.038
SB_22769| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-07) 33 0.087
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 33 0.087
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 30 0.61
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 29 1.1
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 29 1.4
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013) 27 7.6
SB_20174| Best HMM Match : DedA (HMM E-Value=3.7) 26 10.0
SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_10748| Best HMM Match : GETHR (HMM E-Value=1.5) 26 10.0
>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
Length = 322
Score = 128 bits (310), Expect = 1e-30
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = +2
Query: 209 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
MGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYYVT+IDAPGHRDFIKNMITGTSQ
Sbjct: 1 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETLKYYVTVIDAPGHRDFIKNMITGTSQ 60
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 97.1 bits (231), Expect = 5e-21
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 211
M KEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKE+ E+
Sbjct: 1 MPKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKESSEV 49
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 84.2 bits (199), Expect = 4e-17
Identities = 34/84 (40%), Positives = 57/84 (67%)
Frame = +2
Query: 149 YKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT 328
Y G +DKRT+EK+E+EA+E + ++ +W LD + ER++G T+++ F+T + T
Sbjct: 166 YLTGQVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGNTVEVGRAAFDTDTKHFT 225
Query: 329 IIDAPGHRDFIKNMITGTSQG*XG 400
++DAPGH+ F+ NMI+G +Q G
Sbjct: 226 LLDAPGHKSFVPNMISGATQADLG 249
>SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09)
Length = 123
Score = 50.4 bits (115), Expect = 5e-07
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +2
Query: 281 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
+D+ L +F+T +T++DAPGH+DFI NMITG +Q
Sbjct: 1 MDVGLTRFQTKNKVITLMDAPGHKDFIPNMITGAAQ 36
>SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 359
Score = 46.4 bits (105), Expect = 9e-06
Identities = 27/90 (30%), Positives = 45/90 (50%)
Frame = +2
Query: 98 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 277
+I H D+GK+T T L+ G I +EA + K D ++ ER+RGI
Sbjct: 15 IISHPDAGKTTLTEKLLLFGGAI---------QEAGAVKSNKIKKGATSDFMEIERQRGI 65
Query: 278 TIDIALWKFETSKYYVTIIDAPGHRDFIKN 367
++ ++ F + I+D PGH+DF ++
Sbjct: 66 SVATSVLAFNYRDKKINILDTPGHKDFAED 95
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
N ++ HVD GKST L+ G I K + K VLDKL+ ERE
Sbjct: 1943 NFSIVAHVDHGKSTLADRLLEVTGTISKSSDNK----------------QVLDKLQVERE 1986
Query: 269 RGITI 283
RGIT+
Sbjct: 1987 RGITV 1991
>SB_1541| Best HMM Match : MMR_HSR1 (HMM E-Value=0.12)
Length = 347
Score = 34.3 bits (75), Expect = 0.038
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Frame = +2
Query: 86 INIVVIGHVDSGKST-----TTGHLIYKCGGIDKRTI-EKFEKEA---QEMGKGSFKYAW 238
+ + V+G+VD+GKST T G L G +R K E E+ +G +
Sbjct: 230 VRVAVVGNVDAGKSTLLGVLTHGELDNGRGTARQRLFRHKHEMESGRTSSVGNDILGFDN 289
Query: 239 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 379
+ + G +D A E+SK +T ID GH ++K I G
Sbjct: 290 TGQVVNKAEQHGANVDWAKICKESSK-VITFIDLAGHERYLKTTIFG 335
>SB_22769| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-07)
Length = 203
Score = 33.1 bits (72), Expect = 0.087
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +2
Query: 62 KMGKEKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYA 235
K+ + + NI V+GHVDSGK++ L DK + ++G SF+ A
Sbjct: 28 KIKERILNFNIGVLGHVDSGKTSLAKALSTTASTASFDKNPQSQERGITLDLGFSSFQVA 87
Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 379
+ + L R G D+ +T++D PGH IK +I G
Sbjct: 88 -LPEHL---RSAGSEHDLL---------QMTLVDCPGHASLIKTIIGG 122
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 33.1 bits (72), Expect = 0.087
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
M K+ N+ VI HVD GKST T L+ K G I A + G+ F
Sbjct: 12 MDKKLNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------AAAKAGETRF-----T 56
Query: 245 DKLKAERERGITID---IALWKF--ETSKYYVTIIDAPGHRDFIKNMI 373
D K E++R ITI I+L+ E+ Y+T P R F+ N+I
Sbjct: 57 DTRKDEQDRCITIKSTAISLYYELPESDFEYITQPKDPKERGFLINLI 104
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 31.1 bits (67), Expect = 0.35
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N TT V +T+
Sbjct: 236 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSITA 282
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N TT V +++
Sbjct: 437 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISA 483
>SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 30.7 bits (66), Expect = 0.46
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 4/104 (3%)
Frame = +2
Query: 80 THINIVVIGHVDSGKSTTTGHLIYK--CGGIDKRTIEKFE--KEAQEMGKGSFKYAWVLD 247
T I + V+G+V+SGKST G L Y G + + F E Q S + +
Sbjct: 111 TDIRMAVLGNVESGKSTLLGVLTYDELDNGQGRARLNLFRHLHEIQSGRTSSISHEILGF 170
Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 379
E A E S +T ID GH ++K I G
Sbjct: 171 SCTGEVVNYSDGRSAEDVCEQSSKLITFIDLAGHHKYMKTTIFG 214
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 30.3 bits (65), Expect = 0.61
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -2
Query: 283 DCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
D TT+T S YPS+ + +F D T N TT V +++
Sbjct: 344 DFPTTITPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATTLVPSISA 393
Score = 29.9 bits (64), Expect = 0.81
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N TT V +++
Sbjct: 548 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVQSISA 594
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N T V +++
Sbjct: 146 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVPSISA 192
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N TT V +++
Sbjct: 18 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISA 64
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N TT V +++
Sbjct: 420 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISA 466
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N TT V +++
Sbjct: 219 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTPVPSISA 265
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N TT V +++
Sbjct: 236 TTITPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATTLVPSISA 282
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = -2
Query: 367 VLDEISVSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXX 188
V I ++ + N V + +++ TT+T S YPS+ + + +F
Sbjct: 1009 VASSIQLNITSNTTMAVNDTLRTASTSVVFPTTITPSPNITSYPSLMKSAVGNFTSATSV 1068
Query: 187 XLDGTFVNTTTFVDQVTS 134
D T N T V +++
Sbjct: 1069 VFDSTTPNATRLVPSISA 1086
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = -2
Query: 367 VLDEISVSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXX 188
V I ++ + N V + +++ TT+T S YPS+ + + +F
Sbjct: 4 VASSIQLNITSNTTMAVNDTLRTTSTSVVFPTTITPSPNITSYPSLMKSAVGNFTSATSV 63
Query: 187 XLDGTFVNTTTFV 149
+D T N T V
Sbjct: 64 VVDSTTPNATRLV 76
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N T V +++
Sbjct: 1442 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVPSISA 1488
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N T V +++
Sbjct: 437 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRVVPSISA 483
Score = 26.6 bits (56), Expect = 7.6
Identities = 18/75 (24%), Positives = 30/75 (40%)
Frame = -2
Query: 373 DHVLDEISVSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSIFEGSFTHFXXXX 194
+ V I +S + N V + + ++ TT+T S YPS+ + +F
Sbjct: 605 ESVASSIQLSITSNTTMAVNDTLKTTSTSAVFPTTITPSPNITSYPSLMTSAVGNFTSAT 664
Query: 193 XXXLDGTFVNTTTFV 149
+D T N T V
Sbjct: 665 SVVVDSTTPNATRLV 679
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N T V +++
Sbjct: 1844 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVRSISA 1890
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N T V +++
Sbjct: 839 TTITPSPNITSYPSLTTSAVGNFTSATSVVFDSTTPNATRLVPSISA 885
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 274 TTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 134
TT+T S YPS+ + +F D T N T V +++
Sbjct: 1643 TTITPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATRVVPSISA 1689
>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
Length = 663
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 182 EKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
+++ K +EM + K W +KLKAE E
Sbjct: 42 KEYSKLKEEMNSDAVKVKWAQNKLKAELE 70
>SB_20174| Best HMM Match : DedA (HMM E-Value=3.7)
Length = 228
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 83 HINIVVIGHVDSGKSTTTGHLI 148
H+ VIGH+ ST GHLI
Sbjct: 169 HLTSTVIGHLQHLTSTVIGHLI 190
>SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1564
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 143 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 271
L + CGG+++ +E QE+ F+Y +L+ RER
Sbjct: 740 LFFGCGGLNEMLSFLAVQEVQELVISVFRYLVMLEDRAQSRER 782
>SB_10748| Best HMM Match : GETHR (HMM E-Value=1.5)
Length = 126
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 104 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 271
G GK+ + +K ++K+ +EK E E QEM K + ++K K E+++
Sbjct: 52 GKTKDGKTKRWKNKRWKNKSMEKQKMEKQEMEKQEMEKQKME-EQKMEKQKMEKQK 106
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,743,731
Number of Sequences: 59808
Number of extensions: 219503
Number of successful extensions: 555
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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