Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_C19
(401 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 229 6e-61
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 229 6e-61
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 229 6e-61
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 229 6e-61
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 1e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 138 2e-33
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 138 2e-33
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 123 6e-29
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 2e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 2e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 2e-11
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 60 8e-10
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 60 8e-10
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 2e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 51 4e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 40 7e-04
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 40 7e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 34 0.044
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 34 0.044
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.94
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.94
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 25 1.2
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 1.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 1.7
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 2.9
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 2.9
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 2.9
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 2.9
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 3.8
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 27 3.8
Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 26 8.8
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 8.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 229 bits (560), Expect = 6e-61
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQ
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 229 bits (560), Expect = 6e-61
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQ
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 229 bits (560), Expect = 6e-61
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQ
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 229 bits (560), Expect = 6e-61
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQ
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 1e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAER 265
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 138 bits (333), Expect = 2e-33
Identities = 61/105 (58%), Positives = 79/105 (75%)
Frame = +2
Query: 74 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 253
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 254 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 271
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 138 bits (333), Expect = 2e-33
Identities = 61/105 (58%), Positives = 79/105 (75%)
Frame = +2
Query: 74 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 253
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 254 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 289
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 123 bits (296), Expect = 6e-29
Identities = 53/107 (49%), Positives = 76/107 (71%)
Frame = +2
Query: 68 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +Q
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQ 210
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 65.3 bits (152), Expect = 2e-11
Identities = 38/106 (35%), Positives = 54/106 (50%)
Frame = +2
Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 135
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 65.3 bits (152), Expect = 2e-11
Identities = 38/106 (35%), Positives = 54/106 (50%)
Frame = +2
Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 136
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 65.3 bits (152), Expect = 2e-11
Identities = 38/106 (35%), Positives = 54/106 (50%)
Frame = +2
Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 136
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 59.7 bits (138), Expect = 8e-10
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 77 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQ 131
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 59.7 bits (138), Expect = 8e-10
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 77 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQ 131
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDF 358
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 50.8 bits (116), Expect = 4e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDF 358
RGITI A + + IID PGH DF
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDF 125
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 1e-06
Identities = 31/90 (34%), Positives = 42/90 (46%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDF 358
RGIT+ Y + +ID PGH DF
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 39.9 bits (89), Expect = 7e-04
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 217
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 218 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDF 358
+ + L+K E +G T+++ K + + + + +ID+PGH DF
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 39.9 bits (89), Expect = 7e-04
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 217
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 218 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDF 358
+ + L+K E +G T+++ K + + + + +ID+PGH DF
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.9 bits (74), Expect = 0.044
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 71 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 358
+ E+ RGIT+ + + +ID+PGH DF
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.9 bits (74), Expect = 0.044
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 71 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 358
+ E+ RGIT+ + + +ID+PGH DF
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.94
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 167 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.94
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 167 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 212 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDF 358
GK + A ++ A GIT I + E +K VT +D PGH F
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAF 217
Score = 23.0 bits (47), Expect(2) = 1.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 92 IVVIGHVDSGKST 130
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTT 136
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTT 136
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 ESISDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEK 187
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 188 FEKEAQEMGK 217
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 ESISDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEK 187
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 188 FEKEAQEMGK 217
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 ESISDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEK 187
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 188 FEKEAQEMGK 217
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 370
+ + I + Y + IID PGH +F M
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 218
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 370
+ + I + Y + IID PGH +F M
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 93
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 59 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 151
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 59 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 151
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQG 391
W+++KL R +T W ++ YVT I A + + +N++ T +G
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLTVKG 1493
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQG 391
W+++KL R +T W ++ YVT I A + + +N++ T +G
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLTVKG 1493
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQG 391
W+++KL R +T W ++ YVT I A + + +N++ T +G
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLTVKG 1493
>Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical
protein F25D1.1b protein.
Length = 367
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 394 SALRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 284
S LR CD VLDE V S ++ +V+ F PE NI
Sbjct: 251 SDLREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 288
>Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical
protein F25D1.1a protein.
Length = 468
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 394 SALRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 284
S LR CD VLDE V S ++ +V+ F PE NI
Sbjct: 352 SDLREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 389
>Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical
protein B0334.6 protein.
Length = 394
Score = 27.1 bits (57), Expect = 5.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 313 QVLCYHH*CSWTQRFHQEHDHRNLSGLXW 399
Q++ H C+++ H EHD +++S + W
Sbjct: 15 QIIGSHDFCNFSNITHHEHDEQSISIVWW 43
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 26.2 bits (55), Expect = 8.8
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 259
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 260 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 379
RG ++ A E S VT+ID G + K I G
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,722,248
Number of Sequences: 27780
Number of extensions: 162144
Number of successful extensions: 519
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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