BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_C19 (401 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 229 6e-61 U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 229 6e-61 U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 229 6e-61 U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 229 6e-61 U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 1e-33 Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 138 2e-33 Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 138 2e-33 Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 123 6e-29 D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 2e-11 D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 2e-11 AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 2e-11 U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 60 8e-10 AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 60 8e-10 AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 2e-08 Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 51 4e-07 L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 1e-06 Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 40 7e-04 M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 40 7e-04 Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 34 0.044 Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 34 0.044 Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.94 Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.94 Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 25 1.2 Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 1.7 AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 1.7 U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 2.9 M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 2.9 L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 2.9 AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 2.9 Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 3.8 Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 3.8 AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 27 3.8 Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical pr... 27 5.0 Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical pr... 27 5.0 Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical pr... 27 5.0 Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 26 8.8 U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 8.8 >U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor protein 4, isoformc protein. Length = 267 Score = 229 bits (560), Expect = 6e-61 Identities = 105/108 (97%), Positives = 107/108 (99%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQ Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108 >U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor protein 4, isoformd protein. Length = 429 Score = 229 bits (560), Expect = 6e-61 Identities = 105/108 (97%), Positives = 107/108 (99%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQ Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108 >U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor protein 4, isoforma protein. Length = 463 Score = 229 bits (560), Expect = 6e-61 Identities = 105/108 (97%), Positives = 107/108 (99%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQ Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108 >U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor protein 3 protein. Length = 463 Score = 229 bits (560), Expect = 6e-61 Identities = 105/108 (97%), Positives = 107/108 (99%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQ Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108 >U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor protein 4, isoformb protein. Length = 77 Score = 138 bits (335), Expect = 1e-33 Identities = 63/67 (94%), Positives = 64/67 (95%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAER 265 DKLK + Sbjct: 61 DKLKVTK 67 >Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical protein K07A12.4b protein. Length = 592 Score = 138 bits (333), Expect = 2e-33 Identities = 61/105 (58%), Positives = 79/105 (75%) Frame = +2 Query: 74 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 253 +K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226 Query: 254 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 271 >Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein K07A12.4a protein. Length = 610 Score = 138 bits (333), Expect = 2e-33 Identities = 61/105 (58%), Positives = 79/105 (75%) Frame = +2 Query: 74 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 253 +K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244 Query: 254 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 289 >Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical protein H19N07.1 protein. Length = 532 Score = 123 bits (296), Expect = 6e-29 Identities = 53/107 (49%), Positives = 76/107 (71%) Frame = +2 Query: 68 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247 G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163 Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +Q Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQ 210 >D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor Tu homologueprecursor protein. Length = 495 Score = 65.3 bits (152), Expect = 2e-11 Identities = 38/106 (35%), Positives = 54/106 (50%) Frame = +2 Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250 ++K H+N+ IGHVD GK+T T + K+E +D Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89 Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 135 >D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor Tu homologueprecursor protein. Length = 496 Score = 65.3 bits (152), Expect = 2e-11 Identities = 38/106 (35%), Positives = 54/106 (50%) Frame = +2 Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250 ++K H+N+ IGHVD GK+T T + K+E +D Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90 Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 136 >AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation factor (ef-tu), mitochondrialprotein 1 protein. Length = 496 Score = 65.3 bits (152), Expect = 2e-11 Identities = 38/106 (35%), Positives = 54/106 (50%) Frame = +2 Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250 ++K H+N+ IGHVD GK+T T + K+E +D Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90 Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 136 >U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation factor (ef-tu), mitochondrialprotein 2 protein. Length = 439 Score = 59.7 bits (138), Expect = 8e-10 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 77 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250 K ++N+ IGH+D GK+T T + + G K KF++ +DK Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85 Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQ 131 >AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial elongation factorTu homologue protein. Length = 439 Score = 59.7 bits (138), Expect = 8e-10 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 77 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250 K ++N+ IGH+D GK+T T + + G K KF++ +DK Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85 Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 388 K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQ 131 >AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical protein Y119D3B.14 protein. Length = 689 Score = 55.2 bits (127), Expect = 2e-08 Identities = 36/90 (40%), Positives = 46/90 (51%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDF 358 RGIT+ A + + + +ID PGH DF Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103 >Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical protein F29C12.4 protein. Length = 750 Score = 50.8 bits (116), Expect = 4e-07 Identities = 32/90 (35%), Positives = 44/90 (48%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+ Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDF 358 RGITI A + + IID PGH DF Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDF 125 >L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical protein ZK1236.1 protein. Length = 645 Score = 48.8 bits (111), Expect = 1e-06 Identities = 31/90 (34%), Positives = 42/90 (46%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDF 358 RGIT+ Y + +ID PGH DF Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDF 115 >Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein F25H5.4 protein. Length = 852 Score = 39.9 bits (89), Expect = 7e-04 Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 13/111 (11%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 217 M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE + Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72 Query: 218 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDF 358 + + L+K E +G T+++ K + + + + +ID+PGH DF Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123 >M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor protein. Length = 852 Score = 39.9 bits (89), Expect = 7e-04 Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 13/111 (11%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 217 M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE + Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72 Query: 218 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDF 358 + + L+K E +G T+++ K + + + + +ID+PGH DF Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123 >Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical protein K10C3.5b protein. Length = 705 Score = 33.9 bits (74), Expect = 0.044 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Frame = +2 Query: 71 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247 K HI N+ ++ HVD GK++ L+ I R G +Y +D Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59 Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 358 + E+ RGIT+ + + +ID+PGH DF Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96 >Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein K10C3.5a protein. Length = 894 Score = 33.9 bits (74), Expect = 0.044 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Frame = +2 Query: 71 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247 K HI N+ ++ HVD GK++ L+ I R G +Y +D Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59 Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 358 + E+ RGIT+ + + +ID+PGH DF Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96 >Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical protein F54D5.5b protein. Length = 492 Score = 29.5 bits (63), Expect = 0.94 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 167 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 +KR ++ EKE + F Y LDK+K ER+ Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305 >Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical protein F54D5.5a protein. Length = 427 Score = 29.5 bits (63), Expect = 0.94 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 167 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 +KR ++ EKE + F Y LDK+K ER+ Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240 >Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical protein F46B6.6a protein. Length = 702 Score = 24.6 bits (51), Expect(2) = 1.2 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +2 Query: 212 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDF 358 GK + A ++ A GIT I + E +K VT +D PGH F Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAF 217 Score = 23.0 bits (47), Expect(2) = 1.2 Identities = 7/13 (53%), Positives = 11/13 (84%) Frame = +2 Query: 92 IVVIGHVDSGKST 130 + ++GHVD GK+T Sbjct: 159 VTIMGHVDHGKTT 171 >Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical protein C47B2.7b protein. Length = 500 Score = 28.7 bits (61), Expect = 1.7 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +2 Query: 86 INIVVIGHVDSGKSTTT 136 +N+ ++GHVDSGK+T T Sbjct: 14 LNLGILGHVDSGKTTLT 30 >Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical protein C47B2.7a protein. Length = 459 Score = 28.7 bits (61), Expect = 1.7 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +2 Query: 86 INIVVIGHVDSGKSTTT 136 +N+ ++GHVDSGK+T T Sbjct: 14 LNLGILGHVDSGKTTLT 30 >Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein F15D3.1a protein. Length = 3674 Score = 28.7 bits (61), Expect = 1.7 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = +2 Query: 14 ESISDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEK 187 E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + + Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343 Query: 188 FEKEAQEMGK 217 AQE K Sbjct: 1344 MLDGAQEKWK 1353 >Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein F15D3.1a protein. Length = 3674 Score = 28.7 bits (61), Expect = 1.7 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = +2 Query: 14 ESISDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEK 187 E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + + Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343 Query: 188 FEKEAQEMGK 217 AQE K Sbjct: 1344 MLDGAQEKWK 1353 >AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein protein. Length = 3674 Score = 28.7 bits (61), Expect = 1.7 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = +2 Query: 14 ESISDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEK 187 E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + + Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343 Query: 188 FEKEAQEMGK 217 AQE K Sbjct: 1344 MLDGAQEKWK 1353 >U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor protein 1 protein. Length = 974 Score = 27.9 bits (59), Expect = 2.9 Identities = 22/94 (23%), Positives = 39/94 (41%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 N+ + GH+ GK+T L+ ++T +F + E F ++K + Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 370 + + I + Y + IID PGH +F M Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 218 >M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. Length = 849 Score = 27.9 bits (59), Expect = 2.9 Identities = 22/94 (23%), Positives = 39/94 (41%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 N+ + GH+ GK+T L+ ++T +F + E F ++K + Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 370 + + I + Y + IID PGH +F M Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 93 >L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding protein protein. Length = 593 Score = 27.9 bits (59), Expect = 2.9 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 59 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 151 P K+ + V+G+VD+GKST G L + Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162 >AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis gtp-binding proteinprotein 1 protein. Length = 613 Score = 27.9 bits (59), Expect = 2.9 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 59 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 151 P K+ + V+G+VD+GKST G L + Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162 >Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein Y16B4A.2 protein. Length = 2105 Score = 27.5 bits (58), Expect = 3.8 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +2 Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQG 391 W+++KL R +T W ++ YVT I A + + +N++ T +G Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLTVKG 1493 >Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein Y16B4A.2 protein. Length = 2105 Score = 27.5 bits (58), Expect = 3.8 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +2 Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQG 391 W+++KL R +T W ++ YVT I A + + +N++ T +G Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLTVKG 1493 >AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical protein Y16B4A.2 protein. Length = 2105 Score = 27.5 bits (58), Expect = 3.8 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +2 Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQG 391 W+++KL R +T W ++ YVT I A + + +N++ T +G Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLTVKG 1493 >Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical protein F25D1.1b protein. Length = 367 Score = 27.1 bits (57), Expect = 5.0 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = -2 Query: 394 SALRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 284 S LR CD VLDE V S ++ +V+ F PE NI Sbjct: 251 SDLREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 288 >Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical protein F25D1.1a protein. Length = 468 Score = 27.1 bits (57), Expect = 5.0 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = -2 Query: 394 SALRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 284 S LR CD VLDE V S ++ +V+ F PE NI Sbjct: 352 SDLREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 389 >Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical protein B0334.6 protein. Length = 394 Score = 27.1 bits (57), Expect = 5.0 Identities = 9/29 (31%), Positives = 18/29 (62%) Frame = +1 Query: 313 QVLCYHH*CSWTQRFHQEHDHRNLSGLXW 399 Q++ H C+++ H EHD +++S + W Sbjct: 15 QIIGSHDFCNFSNITHHEHDEQSISIVWW 43 >Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical protein T04H1.2 protein. Length = 588 Score = 26.2 bits (55), Expect = 8.8 Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Frame = +2 Query: 86 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 259 + + V+G D GKST G L C G K I F + E+ G K + V + + Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225 Query: 260 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 379 RG ++ A E S VT+ID G + K I G Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269 >U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein F45E4.4 protein. Length = 2361 Score = 26.2 bits (55), Expect = 8.8 Identities = 17/60 (28%), Positives = 26/60 (43%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 +I+ GH+D S GH +K GI E FE E ++ + + + ERE Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,722,248 Number of Sequences: 27780 Number of extensions: 162144 Number of successful extensions: 519 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 511 length of database: 12,740,198 effective HSP length: 74 effective length of database: 10,684,478 effective search space used: 630384202 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -