BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_C09 (652 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_41599| Best HMM Match : PRP1_N (HMM E-Value=4.3) 29 3.3 SB_13629| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 28 5.7 SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43) 28 5.7 SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_39073| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 7.6 SB_22851| Best HMM Match : Sad1_UNC (HMM E-Value=0) 28 7.6 SB_1587| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6 SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6 SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 28 7.6 >SB_41599| Best HMM Match : PRP1_N (HMM E-Value=4.3) Length = 278 Score = 29.1 bits (62), Expect = 3.3 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = +2 Query: 302 GNDDDYEIVSFD-DFSDKSPGSKTDLLTLNDNINYRLYYEADKQSKYLENNGESSKGIDS 478 G +DD E++ D DFS+ + + +D Y DK+ L+N + G + Sbjct: 130 GTEDDSELMYADIDFSNAKNKDNNKIPSNDDKTLYADITSFDKKGNTLKNGDAPTNGQST 189 Query: 479 HTETSLNGARNGS 517 + +TS + S Sbjct: 190 NRQTSSTNGQTSS 202 >SB_13629| Best HMM Match : Extensin_2 (HMM E-Value=0.35) Length = 487 Score = 28.3 bits (60), Expect = 5.7 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +2 Query: 281 YKPEKSGGNDDDYEIVSFDDFSDKSPGSKTD 373 Y ++ G D + + D ++DK PG++TD Sbjct: 203 YPVTRTDGYTDKHPVTRTDGYTDKHPGTRTD 233 >SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43) Length = 607 Score = 28.3 bits (60), Expect = 5.7 Identities = 14/54 (25%), Positives = 27/54 (50%) Frame = +2 Query: 305 NDDDYEIVSFDDFSDKSPGSKTDLLTLNDNINYRLYYEADKQSKYLENNGESSK 466 ND+ + + D+ +D ++ T NDN N +Y + Y +N+ ++SK Sbjct: 271 NDNSNDHIYNDNSNDHIYNDNSNDHTYNDNSNDHIYNDNSNDHIYNDNSNDNSK 324 >SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2248 Score = 28.3 bits (60), Expect = 5.7 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = +2 Query: 329 SFDDFSDKSPGS-KTDLLTLNDNI--NYRLYYEADKQSKYLENNGESSKGIDSHTETSLN 499 SF D SDKS GS TD ++ + ++ + +Y AD SK + + ++ ++ + + Sbjct: 824 SFSDSSDKSSGSDNTDKMSSDKSVKQDSSIYANADMSSKVPDKGSDRNETAKVQSDKATS 883 Query: 500 GARNGS 517 +GS Sbjct: 884 ENNSGS 889 >SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 477 Score = 28.3 bits (60), Expect = 5.7 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 365 KTDLLTLNDNINYRLYYEADKQSKYLENNGESS 463 KT LN+++ +YY +K YLENN E S Sbjct: 125 KTTASELNESLGLGIYY-GNKFEHYLENNAEHS 156 >SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1266 Score = 28.3 bits (60), Expect = 5.7 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +2 Query: 446 NNGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSGGKT 571 + E SK I SH TSL +R+ S R L V KSG K+ Sbjct: 443 DQSERSKSIASHASTSL--SRSSSKRSLGRRSVESRKSGRKS 482 >SB_39073| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 206 Score = 28.3 bits (60), Expect = 5.7 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +2 Query: 296 SGGNDDDYEIVSFDDFSDKSPGSKTDLLTLNDNINY 403 +G DDD +++ D SD G D + ++D+ NY Sbjct: 158 NGDEDDDDDVLVVVDDSDDGVGDDNDKVVVDDSDNY 193 >SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) Length = 915 Score = 27.9 bits (59), Expect = 7.6 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = +2 Query: 392 NINYRLYYEADKQSKYLENNGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSG 562 N+ +Y A L+ N SSK + L +N SF LS S V F K+G Sbjct: 407 NVMDAVYSVAYAVQALLKENTNSSKKTTISPKQLLGYIKNTSFAGLSGSVVSFDKNG 463 >SB_22851| Best HMM Match : Sad1_UNC (HMM E-Value=0) Length = 1705 Score = 27.9 bits (59), Expect = 7.6 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +2 Query: 410 YYEADKQSKYLENNGESSKGIDSHTETSLNGARNGSFRKLSN 535 Y++ DK+S YLE+N E S + T +G+R + +K +N Sbjct: 241 YHKKDKESIYLESNKEQSNTV--ITTLKEHGSRIANSQKTAN 280 >SB_1587| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1497 Score = 27.9 bits (59), Expect = 7.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 413 YEADKQSKYLENNGESSKGIDSHTET 490 YEAD + E +G S+K DSH T Sbjct: 472 YEADLLEELQEKSGASAKSTDSHVST 497 >SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 112 Score = 27.9 bits (59), Expect = 7.6 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 3/108 (2%) Frame = +2 Query: 263 KMPKIPYKPEKSGGNDDDYEIVSFD--DFSDKSPGSKTDLLTLNDNINYRLYYEADKQSK 436 +M K + N+ +Y S++ D ++ S + + N+N N Y E D + Sbjct: 2 RMKTTTMKMTFNNSNNKNYNNNSYNENDNNNNSDNKNDNNNSDNENDNNNSYNENDNSNS 61 Query: 437 YLEN-NGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSGGKTHT 577 EN N S+ D++ + N N + +N+ + K+ T T Sbjct: 62 DNENDNNNSNNENDNNNSNNENDNNNSNNESDNNNIISITKTTVNTST 109 >SB_32980| Best HMM Match : DEAD (HMM E-Value=0) Length = 985 Score = 27.9 bits (59), Expect = 7.6 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 296 SGGNDDDYEIVSFDDFSDKSPGSKTDLLTLNDNINYR 406 S G DD S D S KTDLL N+N+N++ Sbjct: 619 SVGTDDVISDTSDGDSLYTSETCKTDLLNTNNNVNWK 655 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,878,237 Number of Sequences: 59808 Number of extensions: 354871 Number of successful extensions: 1050 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 958 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1049 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1657237625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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