Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_C09
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-19|CAB60433.2| 468|Caenorhabditis elegans Hypothetical... 31 0.54
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend... 31 0.94
U58727-4|AAB00584.2| 148|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 6.6
U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 6.6
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 6.6
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AL110500-19|CAB60433.2| 468|Caenorhabditis elegans Hypothetical
protein Y87G2A.13 protein.
Length = 468
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = -1
Query: 256 SKYTVSFIDRFSEMAVNGSLLYWFFYIFSLNNRRLF----LKIYDTSS 125
S Y VS +D M G L + F +IF++N+ R+F L+ YD S
Sbjct: 156 SSYLVSSVDERGFMISIGCLYFLFSFIFAMNSHRIFDIQMLEAYDKLS 203
>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
chloride bicarbonateanion exchanger alternative variant
a protein.
Length = 1161
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 498 MEQEMDHSENYQILLSHSENPAGRLTRRYLAALSLRMKMNLHLENT 635
ME+E D +I S S P G +R + SL M M +H+EN+
Sbjct: 1 MEEETDEESPAKIARSRSCEPPGSSSRSRESRGSLWMSMGVHVENS 46
>U58727-4|AAB00584.2| 148|Caenorhabditis elegans Hypothetical
protein D1005.5 protein.
Length = 148
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 408 SITKQINNQNI*KTMENHPKVLTVIQKRR*MEQE 509
SI ++ + I K++ NHPKVL VI+KR +E +
Sbjct: 13 SIQILMSGEKIPKSILNHPKVLFVIKKRIPIENQ 46
>AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical
protein Y40B10A.4 protein.
Length = 697
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 190 WFFYIFSLNNRRLFLKIYDTSSNYNWYAIVT*RCNN 83
WF Y FSL + R+ K+ D ++N+ W I +C +
Sbjct: 608 WFAY-FSLFHLRMVKKMADENANFKWALIRAYKCED 642
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 404 RLYYEADKQSKYLENNGESSKGIDSHTETSLNGARNGSFR 523
R YYE QS +L N + ++ ETSL G+ G+ R
Sbjct: 2875 RNYYEVSTQSSHLVMNPNGEETVEKTCETSL-GSLQGAVR 2913
>U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical
protein C03G6.12 protein.
Length = 430
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 452 HCFLDILIVYLLRNRDDNLCYHSKLINQFS 363
+CF DILI + LRN D + ++LI F+
Sbjct: 363 YCFADILINHCLRNYTDGPGHFAELIGIFN 392
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 443 LDILIVYLLRNRD-DNLCYHSKLINQFSNPE 354
LD+ ++ L+N+D D + Y +KL+NQFS +
Sbjct: 776 LDVAVLVDLQNKDYDFMNYITKLLNQFSTQD 806
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 443 LDILIVYLLRNRD-DNLCYHSKLINQFSNPE 354
LD+ ++ L+N+D D + Y +KL+NQFS +
Sbjct: 789 LDVAVLVDLQNKDYDFMNYITKLLNQFSTQD 819
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 404 RLYYEADKQSKYLENNGESSKGIDSHTETSLNGARNGSFR 523
R YYE QS +L N + ++ ETSL G+ G+ R
Sbjct: 2875 RNYYEVSTQSSHLVMNPNGEETVEKTCETSL-GSLQGAVR 2913
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 404 RLYYEADKQSKYLENNGESSKGIDSHTETSLNGARNGSFR 523
R YYE QS +L N + ++ ETSL G+ G+ R
Sbjct: 2875 RNYYEVSTQSSHLVMNPNGEETVEKTCETSL-GSLQGAVR 2913
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 428 QSKYLENNGESSKGIDSHTETSLNGARNGSFRKLS 532
+S L N SS G + +S NG N SFR+LS
Sbjct: 593 ESMKLSNGSNSSAG---SSNSSTNGVNNSSFRRLS 624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,785,040
Number of Sequences: 27780
Number of extensions: 286825
Number of successful extensions: 991
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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