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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_C09
         (652 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR...    31   0.88 
At1g47550.1 68414.m05278 expressed protein                             29   2.0  
At5g43720.1 68418.m05345 expressed protein                             29   3.5  
At2g07630.1 68415.m00881 hypothetical protein                          29   3.5  
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100...    29   3.5  
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s...    28   4.7  
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit...    28   4.7  
At3g16600.1 68416.m02122 SNF2 domain-containing protein / helica...    28   6.2  
At2g16070.2 68415.m01843 expressed protein                             28   6.2  
At2g16070.1 68415.m01842 expressed protein                             28   6.2  
At1g74930.1 68414.m08693 AP2 domain-containing transcription fac...    27   8.2  
At1g47560.1 68414.m05279 expressed protein                             27   8.2  
At1g33070.1 68414.m04079 hypothetical protein                          27   8.2  

>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1234

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +2

Query: 290  EKSGGNDDDYEIVSFDDFSDKSPGSKTDLLTLNDNINYRLYYEADKQSKYLENNGESSKG 469
            E    +DDD ++ S  D+SD+   S  D   L + I+Y   YE D+ +  L N  + S+ 
Sbjct: 1107 EDDESSDDDDDLSSETDYSDECEDS--DDSDLGNEIDYSEDYE-DRDTSDLGNETDYSEE 1163

Query: 470  IDSHTETSL 496
             + H  + L
Sbjct: 1164 YEDHDSSDL 1172


>At1g47550.1 68414.m05278 expressed protein
          Length = 887

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 299 GGNDDDYEIVSFDDFSDKSPGSKT-DLLTLNDNI 397
           G +DDD  I+  D+ +DK PG  + DL  LN+++
Sbjct: 556 GNDDDDLGIMDIDE-TDKKPGKNSPDLTALNESL 588


>At5g43720.1 68418.m05345 expressed protein
          Length = 329

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +2

Query: 290 EKSGGNDDDYEIVSFDDFSDKSPGSKTDLLTLNDNINYRLYYEADKQSKYLENNGESS 463
           E++G  DD    +S DDF DK  GS +D    +D +  +   EA   +     +G SS
Sbjct: 183 EETGSEDDGLLDLSDDDFFDK--GSSSDEADADDELTDKSAKEAASSASGRATSGMSS 238


>At2g07630.1 68415.m00881 hypothetical protein 
          Length = 458

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 178 IFSLNNRRLFLKIYDTSSNYNWYAIVT*RCN 86
           +F +   ++   IYD   +++WY IV  +CN
Sbjct: 248 MFDVGRVKVLCTIYDIDRDWSWYYIVCKKCN 278


>At1g28400.1 68414.m03492 expressed protein similar to E6
           (GI:1000090) [Gossypium barbadense]
          Length = 335

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +2

Query: 281 YKPEKSGGNDDDYEIVSFDDFSDKSPG---SKTDLLTLNDNINYRLYYEAD-KQSKYLEN 448
           Y  E+   N++ Y+    ++F++       +K +    N+N NY   Y+ + K+  + EN
Sbjct: 147 YNNEEFNNNNNKYDANFKEEFNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEESFPEN 206

Query: 449 NGESSKGI 472
           N ++ K +
Sbjct: 207 NEDNKKNV 214


>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
           similar to 1,4-alpha-glucan branching enzyme [Solanum
           tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
           (EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
           tuberosum} SP|P30924; contains Pfam profiles: PF00128
           Alpha amylase catalytic domain, PF02922 Isoamylase
           N-terminal domain
          Length = 777

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 419 ADKQSKYLENNGESSKGIDSHTETSLNGARNGS 517
           ADK   Y EN+ +S  G  S  E    G  NGS
Sbjct: 522 ADKMLSYAENHNQSISGGRSFAEILFGGVDNGS 554


>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
           to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
           GI:9937505; contains Pfam profiles PF00240: Ubiquitin
           family, PF00627: UBA/TS-N domain
          Length = 551

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 440 LENNGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSGGKTHTP 580
           L N G +++G D+   +S   A  G+    +    P+G +GG+T  P
Sbjct: 291 LGNQGVTTQGSDASNNSSTPNAGTGTIPNANPLPNPWGATGGQTTAP 337


>At3g16600.1 68416.m02122 SNF2 domain-containing protein / helicase
           domain-containing protein / RING finger
           domain-containing protein similar to SP|P31244 DNA
           repair protein RAD16 {Saccharomyces cerevisiae};
           contains Pfam profiles PF00271: Helicase conserved
           C-terminal domain, PF00176: SNF2 family N-terminal
           domain, PF00097: Zinc finger, C3HC4 type (RING finger)
          Length = 638

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 455 LHCFLDILIVYLLRNRDDNLCYHSKLINQFSNPEICRK 342
           LH  +  L+V LLR R    C H +L+N +S+ +  RK
Sbjct: 333 LHEHMAYLLVMLLRLRQ--ACNHPQLVNGYSHSDTTRK 368


>At2g16070.2 68415.m01843 expressed protein
          Length = 307

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 440 LENNGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSGGKTH 574
           L+NN      + S  ++  NG  +G  R  + +  P G SGG +H
Sbjct: 165 LDNNNGYLSHLPSKKKSDANGFGSGHVRNEAEAKSPNGGSGGSSH 209


>At2g16070.1 68415.m01842 expressed protein
          Length = 224

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 440 LENNGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSGGKTH 574
           L+NN      + S  ++  NG  +G  R  + +  P G SGG +H
Sbjct: 82  LDNNNGYLSHLPSKKKSDANGFGSGHVRNEAEAKSPNGGSGGSSH 126


>At1g74930.1 68414.m08693 AP2 domain-containing transcription
           factor, putative similar to AP2 domain containing
           protein RAP2.1 GI:2281627 from [Arabidopsis thaliana]
          Length = 195

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -2

Query: 630 SLDEDSFSFLDLTPLNNGV*VFPPDFPNGTKEFDNF 523
           ++D D FSFLDL P+N G   F  DF +G    D F
Sbjct: 138 TVDYD-FSFLDLLPMNFGFDSFSDDF-SGFSGGDRF 171


>At1g47560.1 68414.m05279 expressed protein
          Length = 887

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 299 GGNDDDYEIVSFDDFSDKSPGSKT-DLLTLNDNI 397
           G ++DD  I+  D+ +DK PG  + DL  LN+++
Sbjct: 553 GNDNDDLGIMDIDE-ADKKPGKNSPDLTALNESL 585


>At1g33070.1 68414.m04079 hypothetical protein
          Length = 165

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +2

Query: 371 DLLTLNDNINYRLYYEADKQSKYLENNGESSKGIDSHTETSLNGA 505
           DL  L+ +I++ +  + + + K L NNGESS  +     TS+ GA
Sbjct: 37  DLQDLSFHIDHYIN-QLNSRVKILTNNGESSSSVPPLLHTSVAGA 80


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,644,055
Number of Sequences: 28952
Number of extensions: 253896
Number of successful extensions: 720
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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