Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_C09
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 31 0.88
At1g47550.1 68414.m05278 expressed protein 29 2.0
At5g43720.1 68418.m05345 expressed protein 29 3.5
At2g07630.1 68415.m00881 hypothetical protein 29 3.5
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 29 3.5
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 4.7
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 28 4.7
At3g16600.1 68416.m02122 SNF2 domain-containing protein / helica... 28 6.2
At2g16070.2 68415.m01843 expressed protein 28 6.2
At2g16070.1 68415.m01842 expressed protein 28 6.2
At1g74930.1 68414.m08693 AP2 domain-containing transcription fac... 27 8.2
At1g47560.1 68414.m05279 expressed protein 27 8.2
At1g33070.1 68414.m04079 hypothetical protein 27 8.2
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 30.7 bits (66), Expect = 0.88
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 290 EKSGGNDDDYEIVSFDDFSDKSPGSKTDLLTLNDNINYRLYYEADKQSKYLENNGESSKG 469
E +DDD ++ S D+SD+ S D L + I+Y YE D+ + L N + S+
Sbjct: 1107 EDDESSDDDDDLSSETDYSDECEDS--DDSDLGNEIDYSEDYE-DRDTSDLGNETDYSEE 1163
Query: 470 IDSHTETSL 496
+ H + L
Sbjct: 1164 YEDHDSSDL 1172
>At1g47550.1 68414.m05278 expressed protein
Length = 887
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 299 GGNDDDYEIVSFDDFSDKSPGSKT-DLLTLNDNI 397
G +DDD I+ D+ +DK PG + DL LN+++
Sbjct: 556 GNDDDDLGIMDIDE-TDKKPGKNSPDLTALNESL 588
>At5g43720.1 68418.m05345 expressed protein
Length = 329
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 290 EKSGGNDDDYEIVSFDDFSDKSPGSKTDLLTLNDNINYRLYYEADKQSKYLENNGESS 463
E++G DD +S DDF DK GS +D +D + + EA + +G SS
Sbjct: 183 EETGSEDDGLLDLSDDDFFDK--GSSSDEADADDELTDKSAKEAASSASGRATSGMSS 238
>At2g07630.1 68415.m00881 hypothetical protein
Length = 458
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 178 IFSLNNRRLFLKIYDTSSNYNWYAIVT*RCN 86
+F + ++ IYD +++WY IV +CN
Sbjct: 248 MFDVGRVKVLCTIYDIDRDWSWYYIVCKKCN 278
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 281 YKPEKSGGNDDDYEIVSFDDFSDKSPG---SKTDLLTLNDNINYRLYYEAD-KQSKYLEN 448
Y E+ N++ Y+ ++F++ +K + N+N NY Y+ + K+ + EN
Sbjct: 147 YNNEEFNNNNNKYDANFKEEFNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEESFPEN 206
Query: 449 NGESSKGI 472
N ++ K +
Sbjct: 207 NEDNKKNV 214
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 419 ADKQSKYLENNGESSKGIDSHTETSLNGARNGS 517
ADK Y EN+ +S G S E G NGS
Sbjct: 522 ADKMLSYAENHNQSISGGRSFAEILFGGVDNGS 554
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 440 LENNGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSGGKTHTP 580
L N G +++G D+ +S A G+ + P+G +GG+T P
Sbjct: 291 LGNQGVTTQGSDASNNSSTPNAGTGTIPNANPLPNPWGATGGQTTAP 337
>At3g16600.1 68416.m02122 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P31244 DNA
repair protein RAD16 {Saccharomyces cerevisiae};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 638
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 455 LHCFLDILIVYLLRNRDDNLCYHSKLINQFSNPEICRK 342
LH + L+V LLR R C H +L+N +S+ + RK
Sbjct: 333 LHEHMAYLLVMLLRLRQ--ACNHPQLVNGYSHSDTTRK 368
>At2g16070.2 68415.m01843 expressed protein
Length = 307
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 440 LENNGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSGGKTH 574
L+NN + S ++ NG +G R + + P G SGG +H
Sbjct: 165 LDNNNGYLSHLPSKKKSDANGFGSGHVRNEAEAKSPNGGSGGSSH 209
>At2g16070.1 68415.m01842 expressed protein
Length = 224
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 440 LENNGESSKGIDSHTETSLNGARNGSFRKLSNSFVPFGKSGGKTH 574
L+NN + S ++ NG +G R + + P G SGG +H
Sbjct: 82 LDNNNGYLSHLPSKKKSDANGFGSGHVRNEAEAKSPNGGSGGSSH 126
>At1g74930.1 68414.m08693 AP2 domain-containing transcription
factor, putative similar to AP2 domain containing
protein RAP2.1 GI:2281627 from [Arabidopsis thaliana]
Length = 195
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 630 SLDEDSFSFLDLTPLNNGV*VFPPDFPNGTKEFDNF 523
++D D FSFLDL P+N G F DF +G D F
Sbjct: 138 TVDYD-FSFLDLLPMNFGFDSFSDDF-SGFSGGDRF 171
>At1g47560.1 68414.m05279 expressed protein
Length = 887
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 299 GGNDDDYEIVSFDDFSDKSPGSKT-DLLTLNDNI 397
G ++DD I+ D+ +DK PG + DL LN+++
Sbjct: 553 GNDNDDLGIMDIDE-ADKKPGKNSPDLTALNESL 585
>At1g33070.1 68414.m04079 hypothetical protein
Length = 165
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 371 DLLTLNDNINYRLYYEADKQSKYLENNGESSKGIDSHTETSLNGA 505
DL L+ +I++ + + + + K L NNGESS + TS+ GA
Sbjct: 37 DLQDLSFHIDHYIN-QLNSRVKILTNNGESSSSVPPLLHTSVAGA 80
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,644,055
Number of Sequences: 28952
Number of extensions: 253896
Number of successful extensions: 720
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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