Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_C04
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 194 7e-50
SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10) 68 6e-12
SB_42397| Best HMM Match : rve (HMM E-Value=0.0007) 28 5.8
SB_33649| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_9689| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 28 5.8
SB_59335| Best HMM Match : rve (HMM E-Value=0.0065) 28 7.6
SB_44641| Best HMM Match : rve (HMM E-Value=1.9e-19) 28 7.6
SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05) 28 7.6
SB_30616| Best HMM Match : Pox_A32 (HMM E-Value=0.0095) 28 7.6
SB_53423| Best HMM Match : Pox_A32 (HMM E-Value=0.0095) 28 7.6
SB_39424| Best HMM Match : Pox_A32 (HMM E-Value=0.033) 28 7.6
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 7.6
SB_23587| Best HMM Match : ERp29 (HMM E-Value=1.6e-06) 28 7.6
SB_13182| Best HMM Match : Pox_A32 (HMM E-Value=0.033) 28 7.6
SB_473| Best HMM Match : Ribosomal_60s (HMM E-Value=0.97) 28 7.6
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 194 bits (472), Expect = 7e-50
Identities = 94/136 (69%), Positives = 111/136 (81%)
Frame = +3
Query: 237 GSSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYR 416
G SR+ SRTD EAV REEEAI D L+VAQMKELRD+A+ + FQ EVNRMMKLIINSLYR
Sbjct: 39 GKSRDASRTDDEAVQREEEAIKLDGLNVAQMKELRDKAEKHEFQAEVNRMMKLIINSLYR 98
Query: 417 NKEIXLRELISNGXDALDKIRLMSLTDRGVLEANPELXIRIKAEPDKRLLHIIDSGVGMT 596
NKEI LRELISN DALDKIRLMSLTD+ ++ EL I+IKA+ + +LH+ D+G+GMT
Sbjct: 99 NKEIFLRELISNSSDALDKIRLMSLTDKTAFDSGDELSIKIKADKENNILHVTDTGIGMT 158
Query: 597 RADLINNLGTIAKSGT 644
+ +LI NLGTIAKSGT
Sbjct: 159 KEELIKNLGTIAKSGT 174
>SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10)
Length = 739
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +3
Query: 372 EVNRMMKLIINSLYRN-KEIXLRELISNGXDALDKIRLMSLTDRGVLEANPELXIRIKAE 548
+V ++L+++S ++ +RE+ISN DAL+K+R LT + V E L I I+ +
Sbjct: 66 DVEEPLELLMSSQKTKLSQVFIREVISNASDALEKVRHFFLTGKDVSETETSLEIMIETD 125
Query: 549 PDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADF 653
+ I D+GVGMT +L+++LG IAKSG+ F
Sbjct: 126 QEAGTFTIQDNGVGMTEEELMDHLGVIAKSGSKVF 160
>SB_42397| Best HMM Match : rve (HMM E-Value=0.0007)
Length = 729
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 240 SSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQ 353
+SR S+++ E A PDA +AQM +RD AQ
Sbjct: 418 TSRHPSQSNTEEKAPLCSASPPDAAEIAQMTAIRDTAQ 455
>SB_33649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL A +P ES+ CS+ +G+A
Sbjct: 406 IALVERLLEEGAAGLPAVESLDCSTHPAGTA 436
>SB_9689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 324 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIXLRELIS 449
QM++L DR QT+ +K++ N LY+ KE +RE I+
Sbjct: 82 QMRKLIDRMD----QTKKEMCLKVLTNILYQGKEGKIREAIN 119
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 240 SSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQ 353
+SR S+++ E A PDA +AQM +RD AQ
Sbjct: 420 TSRHPSQSNTEEKAPLCSASPPDAAEIAQMTAIRDTAQ 457
>SB_59335| Best HMM Match : rve (HMM E-Value=0.0065)
Length = 1020
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 382 IALVERLLEGGAAGLPAVESLGCSTQPAGAA 412
>SB_44641| Best HMM Match : rve (HMM E-Value=1.9e-19)
Length = 840
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/89 (23%), Positives = 38/89 (42%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSALMRXLSSGFASSTPRSVSDIRRILSNASX 455
+A+V RLL A +P ES+ CS+ +G+A S + D++R+ +
Sbjct: 158 IALVERLLEGGAAGLPAVESLDCSTHPAGAATGASGKSREMVGKALTHDDVKRMSAEEVR 217
Query: 454 PFEINSRRXISLFL*SELMMSFIMRLTSV 368
+E ++ L SF+ T +
Sbjct: 218 KYERRYETALASRTTDALAESFLKLTTKL 246
>SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05)
Length = 1081
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 418 IALVERLLEGGAAGLPAVESLGCSTQPAGTA 448
>SB_30616| Best HMM Match : Pox_A32 (HMM E-Value=0.0095)
Length = 396
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL SA P ES+ CS++ +G+A
Sbjct: 195 IALVERLLEGSAAGPPAVESLGCSTQPAGTA 225
>SB_53423| Best HMM Match : Pox_A32 (HMM E-Value=0.0095)
Length = 1148
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL SA P ES+ CS++ +G+A
Sbjct: 462 IALVERLLEGSAAGPPAVESLGCSTQPAGTA 492
>SB_39424| Best HMM Match : Pox_A32 (HMM E-Value=0.033)
Length = 1004
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 859 IALVERLLEGGAAGLPAVESLGCSTQPAGTA 889
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 590 IALVERLLEGGAAGLPAVESLGCSTQPAGTA 620
>SB_23587| Best HMM Match : ERp29 (HMM E-Value=1.6e-06)
Length = 83
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 285 EEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKE 425
+E+ S + V MK+++++ Y TE+ R+ KL+ + L NK+
Sbjct: 15 DEKGKSSGDMYVKIMKKIQEKGTGY-IDTEITRVKKLLKDKLTENKK 60
>SB_13182| Best HMM Match : Pox_A32 (HMM E-Value=0.033)
Length = 745
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 242 IALVERLLEGGAAGLPAVESLGCSTQPAGTA 272
>SB_473| Best HMM Match : Ribosomal_60s (HMM E-Value=0.97)
Length = 757
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 634 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 542
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 519 IALVERLLEGGAAGLPAVESLDCSTQPAGTA 549
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,570,410
Number of Sequences: 59808
Number of extensions: 248263
Number of successful extensions: 765
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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