BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_B22 (650 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY061170-1|AAL28718.1| 230|Drosophila melanogaster LD13807p pro... 94 1e-19 AE014298-915|AAF46178.1| 230|Drosophila melanogaster CG3226-PA ... 94 1e-19 AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein... 29 4.1 >AY061170-1|AAL28718.1| 230|Drosophila melanogaster LD13807p protein. Length = 230 Score = 94.3 bits (224), Expect = 1e-19 Identities = 56/158 (35%), Positives = 85/158 (53%) Frame = +1 Query: 130 IQEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEVSPIPTTST 309 +++++SD+ E+ L+QAK +V+D+L+ + T S+ Sbjct: 3 LEQLKSDVAELAAFLQQAKGARVKDVLTTA---KAEAEREIVNLELKAKIAAERQATGSS 59 Query: 310 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 489 A K+Y +L YGWDQS KFVK+F+ L V +E V T S++LHV +L+ K Sbjct: 60 EA---KRYLHELTDYGWDQSAKFVKLFITLNGVQGCTEENVTVTYTPNSLQLHVRDLQGK 116 Query: 490 DYLLVINKLLEPINVADSHWKQKTDKVVIFLGKI*SKH 603 D+ L +N LL I+V S+ K KTD V I+L K+ KH Sbjct: 117 DFGLTVNNLLHSIDVEKSYRKIKTDMVAIYLQKVEDKH 154 >AE014298-915|AAF46178.1| 230|Drosophila melanogaster CG3226-PA protein. Length = 230 Score = 94.3 bits (224), Expect = 1e-19 Identities = 56/158 (35%), Positives = 85/158 (53%) Frame = +1 Query: 130 IQEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEVSPIPTTST 309 +++++SD+ E+ L+QAK +V+D+L+ + T S+ Sbjct: 3 LEQLKSDVAELAAFLQQAKGARVKDVLTTA---KAEAEREIVNLELKAKIAAERQATGSS 59 Query: 310 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 489 A K+Y +L YGWDQS KFVK+F+ L V +E V T S++LHV +L+ K Sbjct: 60 EA---KRYLHELTDYGWDQSAKFVKLFITLNGVQGCTEENVTVTYTPNSLQLHVRDLQGK 116 Query: 490 DYLLVINKLLEPINVADSHWKQKTDKVVIFLGKI*SKH 603 D+ L +N LL I+V S+ K KTD V I+L K+ KH Sbjct: 117 DFGLTVNNLLHSIDVEKSYRKIKTDMVAIYLQKVEDKH 154 >AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein protein. Length = 2797 Score = 29.5 bits (63), Expect = 4.1 Identities = 15/53 (28%), Positives = 32/53 (60%) Frame = +1 Query: 61 FVISKDLHSIQTNCSFIKMSEAKIQEIRSDIEEINDLLKQAKRKKVQDLLSLE 219 F ++K++ ++ N + + EAK Q+ SD++E +LL+Q + + + +LE Sbjct: 1807 FEVNKEVLPLKAN---LAVQEAKYQKASSDLQEAEELLQQKENELAEVQQTLE 1856 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,921,722 Number of Sequences: 53049 Number of extensions: 503561 Number of successful extensions: 1475 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1427 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1475 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2765538900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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