Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B21
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38...    28   5.6  
09_04_0071 - 14313737-14315091,14316131-14316207,14316604-143167...    28   5.6  
02_05_0549 + 29900714-29900953,29902224-29902323,29902578-299027...    28   5.6  
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923...    28   7.4  
10_08_1061 - 22622805-22622961,22623262-22623441,22623482-226234...    27   9.7  
07_03_1788 + 29523216-29524867,29525048-29525075                       27   9.7  
04_04_0699 - 27345243-27346199                                         27   9.7  

>10_01_0030 -
           386008-388056,388166-388360,388931-389062,389167-389538,
           389753-389894,392274-392533,392737-393015,394796-394939
          Length = 1190

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 485 HHHEQGRLCGNCYKKIGKETKEIQGEILKKXRQWTH*TRCYC 610
           H  +  R C +C + + +E KE++   LK+ R+  H T  +C
Sbjct: 227 HRFDSKRFCRDCRRNVIREFKELKE--LKRLRREHHCTSWFC 266


>09_04_0071 -
           14313737-14315091,14316131-14316207,14316604-14316725,
           14316838-14316924,14317000-14317066,14317135-14317290,
           14318689-14318837
          Length = 670

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
 Frame = +2

Query: 458 NLKTCHECG----HHHEQGRLCGNCYKKIGKETK-EIQGEI 565
           N+  C  CG    H H     CG  Y K+G  T  E+Q  +
Sbjct: 178 NVDNCSTCGNMLCHWHNHKMNCGGTYTKMGTSTSAEVQNNV 218


>02_05_0549 +
           29900714-29900953,29902224-29902323,29902578-29902719,
           29902720-29902826,29903179-29903480
          Length = 296

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +2

Query: 470 CHECGHHH--EQGRLCGNCYKKIG 535
           C  CGH+H  E+G  CG C  + G
Sbjct: 10  CEICGHYHNSEEGERCGVCGHRSG 33


>06_02_0041 + 10889741-10890092,10890161-10890235,10891139-10892341,
            10892970-10893253,10893343-10893459,10894126-10894388,
            10894557-10894725,10894838-10895110,10895674-10895718,
            10896472-10896591,10896926-10896987,10897296-10897318,
            10897911-10898128
          Length = 1067

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/65 (27%), Positives = 34/65 (52%)
 Frame = +2

Query: 224  NLERSILLSLFGHPPKELALAVSVNQQPKPTPKAFSIHDLIGDGFLLAVPKFRRTVEKRL 403
            N+   I+L +   PPK L +   + +Q    PKA ++   IG  +L +    ++  ++ L
Sbjct: 912  NILHKIILIVSKFPPK-LHMRYQL-EQISSKPKACNVQVSIGIAWLKSCKNRKKIAQEFL 969

Query: 404  NRKFG 418
            N++FG
Sbjct: 970  NKRFG 974


>10_08_1061 -
           22622805-22622961,22623262-22623441,22623482-22623489,
           22623682-22623845,22623969-22624134
          Length = 224

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 260 HPPKELALAVSVNQQPKPTPKAFSIHDLIGDG 355
           HPP  LA   ++   P+   K   +H  IGDG
Sbjct: 73  HPPLSLADTAAMASTPQTNRKLAVLHHAIGDG 104


>07_03_1788 + 29523216-29524867,29525048-29525075
          Length = 559

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +2

Query: 239 ILLSLFGHPPKELALAVSVNQQP-KPTPKAFSIHDLIGDGFLLAVPKFRRTVEKRLNRKF 415
           +L+S FG   K LA   +   +P +P      ++D   D F  A+       E+R+    
Sbjct: 91  LLVSFFGD--KALAWCDAAQLRPYEPYFPVAELYDGEADDFDAALDASLLEFERRVELAL 148

Query: 416 GWPEYVWKPFVPKTNLKTCHECGHH 490
             P  + +PF+P+  +   H+   H
Sbjct: 149 TAPGRIARPFLPRDFIALLHDLAAH 173


>04_04_0699 - 27345243-27346199
          Length = 318

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 360 KNPSPIKS*MEKALGVGFGC*LTETANASSFGG*PKRLNR 241
           K PSP  +  E +      C  T T++++S  G PKR  R
Sbjct: 232 KRPSPEPATSESSFSSSSSCTTTTTSSSTSSSGSPKRRKR 271


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,026,605
Number of Sequences: 37544
Number of extensions: 310726
Number of successful extensions: 709
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)