Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B14
         (459 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3345| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.4  
SB_50593| Best HMM Match : KIX (HMM E-Value=8)                         28   3.2  
SB_22415| Best HMM Match : TT_ORF2 (HMM E-Value=3.7)                   28   4.3  
SB_25430| Best HMM Match : MFS_1 (HMM E-Value=1.3e-33)                 27   7.5  
SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0)               27   9.9  

>SB_3345| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 122

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +1

Query: 91  QDLVGNCFILFCALNFFLVFGIVKKTNKYRG*LDSNSKIEIQLILTSEESFIKHD 255
           Q +   C I     NF+L     K   KYR  +D N  + +  I  S+E  ++H+
Sbjct: 40  QGVKQGCMISPTLFNFYLSDLPEKLNEKYRNDIDLNEYLRLASIRVSDEKDLEHE 94


>SB_50593| Best HMM Match : KIX (HMM E-Value=8)
          Length = 139

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 109 CFILFCALNFFLVFGIVKKTNKYRG*LDSNSKIEIQLILTSEESFIKHD 255
           C I     NF+L     K   KYR  +D N  + +  I  S+E  ++H+
Sbjct: 80  CMISPTLFNFYLSDLPEKLNEKYRNDIDLNEYLRLASIRVSDEKDLEHE 128


>SB_22415| Best HMM Match : TT_ORF2 (HMM E-Value=3.7)
          Length = 483

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 116 IKQFPTRSWRAYRNNIRYVIFEFEIGIRVLRPTRVG 9
           +   P + WR + N++  VI + E  I V RP  +G
Sbjct: 425 VTAIPYKVWRNWVNDVSDVIIKMEGEISVARPNAIG 460


>SB_25430| Best HMM Match : MFS_1 (HMM E-Value=1.3e-33)
          Length = 607

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 354 CIKKITKQRRRIVPTCYRNQGLKNLDG 434
           C+K  +K  R +VPTCY+ Q    +DG
Sbjct: 10  CVKSDSKMER-MVPTCYKCQPTGVIDG 35


>SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0)
          Length = 734

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 66  ICYFRIRNWNTRSPPD 19
           IC+F++ NW+  S PD
Sbjct: 619 ICHFQVTNWSDHSVPD 634


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,061,989
Number of Sequences: 59808
Number of extensions: 229041
Number of successful extensions: 539
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)