Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B14
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83102-4|CAB05467.1|  259|Caenorhabditis elegans Hypothetical pr...    30   0.70 
U15304-1|AAA50369.1|  407|Caenorhabditis elegans PES-10 protein.       29   1.6  
AL110485-21|CAB60370.1|  407|Caenorhabditis elegans Hypothetical...    29   1.6  
U67949-9|AAM69108.1|  486|Caenorhabditis elegans Hypothetical pr...    28   3.8  
U67949-8|AAD32274.1|  626|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z93386-3|CAB07648.1|  230|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    27   6.6  
U08139-1|AAA83388.1|  192|Caenorhabditis elegans ubc-1 protein.        27   6.6  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    27   6.6  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    27   6.6  
AF045638-8|AAC02561.2|  192|Caenorhabditis elegans Ubiquitin con...    27   6.6  
AF043699-4|AAB97568.1|  610|Caenorhabditis elegans Serotonin/oct...    27   8.7  
AC006655-1|AAF39875.1|  391|Caenorhabditis elegans Serpentine re...    27   8.7  

>Z83102-4|CAB05467.1|  259|Caenorhabditis elegans Hypothetical
           protein C54C8.5 protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -2

Query: 308 SSRTLCILAEARKQISALSCLIKLSS-LVRIN*ISILLFESSHPRYLFV--FLTIPNTKK 138
           S+RT+ ++    K+I+ L  +I+L++ L  +  +  ++ E  +     V   L   N   
Sbjct: 11  SNRTIIVVTPTYKRITRLPDMIRLANTLAHVKNLHWIVVEDGYGIVPAVRELLEKTNLSY 70

Query: 137 KFNAQNKIKQFPTRSWRAYRNNIRYV 60
            + A    K +PTR W      +RY+
Sbjct: 71  TYMAHKTAKGYPTRGWYQRTMALRYI 96


>U15304-1|AAA50369.1|  407|Caenorhabditis elegans PES-10 protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
 Frame = +1

Query: 94  DLVGNCFILFCA----LNFFLVFGIVKKTNKYRG*LDSNSKI--EIQLILTSEESFIKHD 255
           +L  +CF +  +    LN +  FGI +K  +Y+G ++   KI  ++  +L   E F++ D
Sbjct: 113 ELTRSCFDIIVSFGLTLNAYDEFGIFRKAMEYQGQMEEADKIISDVDAMLLRNE-FLEED 171

Query: 256 KAE 264
           +AE
Sbjct: 172 EAE 174


>AL110485-21|CAB60370.1|  407|Caenorhabditis elegans Hypothetical
           protein Y46G5A.27 protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
 Frame = +1

Query: 94  DLVGNCFILFCA----LNFFLVFGIVKKTNKYRG*LDSNSKI--EIQLILTSEESFIKHD 255
           +L  +CF +  +    LN +  FGI +K  +Y+G ++   KI  ++  +L   E F++ D
Sbjct: 113 ELTRSCFDIIVSFGLTLNAYDEFGIFRKAMEYQGQMEEADKIISDVDAMLLRNE-FLEED 171

Query: 256 KAE 264
           +AE
Sbjct: 172 EAE 174


>U67949-9|AAM69108.1|  486|Caenorhabditis elegans Hypothetical
           protein F55A4.8b protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 395 GYNAPPLLGNFLYTIG*FHL 336
           GY A P++G F Y IG F L
Sbjct: 227 GYTAGPVIGGFFYDIGGFQL 246


>U67949-8|AAD32274.1|  626|Caenorhabditis elegans Hypothetical
           protein F55A4.8a protein.
          Length = 626

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 395 GYNAPPLLGNFLYTIG*FHL 336
           GY A P++G F Y IG F L
Sbjct: 367 GYTAGPVIGGFFYDIGGFQL 386


>Z93386-3|CAB07648.1|  230|Caenorhabditis elegans Hypothetical
           protein R11H6.4 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 236 SSLVRIN*ISILLFESS--HPRYLFVFLTIPNT 144
           ++  R+  +SI+LF  S  HP   F FL+ PNT
Sbjct: 47  NNFCRLLVVSIILFYQSVTHPHRFFFFLSSPNT 79


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 427  RFLSPWFL*HVGTMRLRCLVIFFIQ 353
            RFLS WFL +  T+ L   ++F IQ
Sbjct: 984  RFLSAWFLSYASTLPLIYFLVFNIQ 1008


>U08139-1|AAA83388.1|  192|Caenorhabditis elegans ubc-1 protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = +2

Query: 224 SLARKVLLNMIKPRFAFALLLICIVSVTIAVVPLSSSSNEINQLYKENYQATEAHCTHVL 403
           S+   +L N   P +  A +L  I S+     P S +++   QLY+EN +  E     ++
Sbjct: 86  SICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIV 145

Query: 404 QK 409
           ++
Sbjct: 146 EQ 147


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 427  RFLSPWFL*HVGTMRLRCLVIFFIQ 353
            RFLS WFL +  T+ L   ++F IQ
Sbjct: 984  RFLSAWFLSYASTLPLIYFLVFNIQ 1008


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 427  RFLSPWFL*HVGTMRLRCLVIFFIQ 353
            RFLS WFL +  T+ L   ++F IQ
Sbjct: 984  RFLSAWFLSYASTLPLIYFLVFNIQ 1008


>AF045638-8|AAC02561.2|  192|Caenorhabditis elegans Ubiquitin
           conjugating enzyme protein1 protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = +2

Query: 224 SLARKVLLNMIKPRFAFALLLICIVSVTIAVVPLSSSSNEINQLYKENYQATEAHCTHVL 403
           S+   +L N   P +  A +L  I S+     P S +++   QLY+EN +  E     ++
Sbjct: 86  SICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIV 145

Query: 404 QK 409
           ++
Sbjct: 146 EQ 147


>AF043699-4|AAB97568.1|  610|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 3 protein.
          Length = 610

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 97  LVGNCFILFCALNFFLVFGIVKKTN 171
           +V  CFI FC L F LV+G+  K N
Sbjct: 490 IVTGCFI-FCWLGFALVYGLEIKLN 513


>AC006655-1|AAF39875.1|  391|Caenorhabditis elegans Serpentine
           receptor, class w protein6 protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -1

Query: 261 GFIMFN--KTFLASEN*LNLNFTIRI*SPAIFICFFNDSEY 145
           GF MF   KT     N + L F +      IF+CFF  S+Y
Sbjct: 305 GFEMFQTLKTLFMHLNSITLLFLMASSFSHIFVCFFMSSQY 345


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,880,775
Number of Sequences: 27780
Number of extensions: 186090
Number of successful extensions: 521
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)