Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B12
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB75BE Cluster: PREDICTED: similar to CG5558-PB,...    56   7e-07
UniRef50_UPI0000D57008 Cluster: PREDICTED: similar to CG5558-PA,...    47   5e-04
UniRef50_UPI00015B50AA Cluster: PREDICTED: similar to williams-b...    42   0.010
UniRef50_Q9VDZ4 Cluster: CG5558-PA, isoform A; n=13; Sophophora|...    34   2.6  
UniRef50_P16789 Cluster: Alkaline exonuclease; n=4; Cytomegalovi...    34   3.4  
UniRef50_A4CGY5 Cluster: Putative uncharacterized protein; n=2; ...    33   7.8  

>UniRef50_UPI0000DB75BE Cluster: PREDICTED: similar to CG5558-PB,
           isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG5558-PB, isoform B - Apis mellifera
          Length = 578

 Score = 56.0 bits (129), Expect = 7e-07
 Identities = 22/37 (59%), Positives = 31/37 (83%)
 Frame = +3

Query: 261 VLAKLFVYSVAMFTLPFVAFFGVHYLLSDYYHLETFV 371
           VL KLF+YS+AMFTLPFVAFFGV +++   +H++ F+
Sbjct: 150 VLGKLFLYSIAMFTLPFVAFFGVQHIMKAEFHVDRFI 186



 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = +1

Query: 67  KMFEHSVKVPRHYKIAANILKKVSTEGGSVKTLLYDDK 180
           K F HS+KVPR YK AA I+++V  +GGS+K+L+Y+ +
Sbjct: 3   KEFVHSIKVPRLYKSAAKIIQEVREKGGSLKSLIYNQR 40


>UniRef50_UPI0000D57008 Cluster: PREDICTED: similar to CG5558-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG5558-PA, isoform A - Tribolium castaneum
          Length = 753

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 20/37 (54%), Positives = 29/37 (78%)
 Frame = +1

Query: 70  MFEHSVKVPRHYKIAANILKKVSTEGGSVKTLLYDDK 180
           MF+HS++VPR YK A+ I K+VS+  GS+K L+Y+ K
Sbjct: 1   MFDHSIRVPRLYKTASKIAKEVSSGKGSIKQLVYECK 37


>UniRef50_UPI00015B50AA Cluster: PREDICTED: similar to
           williams-beuren syndrome critical region protein; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to
           williams-beuren syndrome critical region protein -
           Nasonia vitripennis
          Length = 734

 Score = 42.3 bits (95), Expect = 0.010
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = +1

Query: 64  SKMFEHSVKVPRHYKIAANILKKVSTEGGSVKTLLY 171
           S  F HSVKVPR YK  A+ +KKV  +G S KTL++
Sbjct: 2   STTFVHSVKVPRIYKECASTVKKVLADGASFKTLVF 37


>UniRef50_Q9VDZ4 Cluster: CG5558-PA, isoform A; n=13;
           Sophophora|Rep: CG5558-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 433

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 79  HSVKVPRHYKIAANILKKVSTEGGSVKTLLYDDK 180
           HS+KVP  Y+  A ILK    +   +KTL++ +K
Sbjct: 6   HSIKVPTQYRATAKILKAALEQQKCIKTLIFAEK 39


>UniRef50_P16789 Cluster: Alkaline exonuclease; n=4;
           Cytomegalovirus|Rep: Alkaline exonuclease - Human
           cytomegalovirus (strain AD169) (HHV-5) (Human
           herpesvirus 5)
          Length = 584

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
 Frame = +3

Query: 192 H*LRMADGDEGPLIPIQTKLAVIVLAKLFVYSVAMFTLP-FV-----AFFGV---HYLLS 344
           H LR + GD  P IP + +    +L +L VY VA F+LP FV      +F +    Y+LS
Sbjct: 414 HHLRGSPGDSPPPIPFEDENTPELLGRLNVYEVARFSLPAFVNPRHQYYFQMLIQQYVLS 473

Query: 345 DYY 353
            YY
Sbjct: 474 QYY 476


>UniRef50_A4CGY5 Cluster: Putative uncharacterized protein; n=2;
           Flavobacteriaceae|Rep: Putative uncharacterized protein
           - Robiginitalea biformata HTCC2501
          Length = 283

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 61  KSKMFEHSVKVPRHYKIAANILKKVSTEGGSVKTLLYDDK 180
           KSK+ EH + + R  K   ++LKKV  +G   K +L D +
Sbjct: 234 KSKLLEHGIVLCREIKDNPDVLKKVGIDGARRKKILADSQ 273


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,864,206
Number of Sequences: 1657284
Number of extensions: 9824098
Number of successful extensions: 19644
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19638
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)