Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B12
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2636|AAF55643.2|  426|Drosophila melanogaster CG5558-PB...    45   1e-04
AY069449-1|AAL39594.1|  433|Drosophila melanogaster LD16340p pro...    34   0.15 
AE014297-2635|AAF55642.1|  433|Drosophila melanogaster CG5558-PA...    34   0.15 

>AE014297-2636|AAF55643.2|  426|Drosophila melanogaster CG5558-PB,
           isoform B protein.
          Length = 426

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 273 LFVYSVAMFTLPFVAFFGVH-YLLSDYYHLETFVVTVWS 386
           L  YSV MFTLPF+ F+GV  +L   + HL+ F V  WS
Sbjct: 46  LLAYSVLMFTLPFLGFYGVRSWLQESFPHLDLFTVNCWS 84


>AY069449-1|AAL39594.1|  433|Drosophila melanogaster LD16340p
           protein.
          Length = 433

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 79  HSVKVPRHYKIAANILKKVSTEGGSVKTLLYDDK 180
           HS+KVP  Y+  A ILK    +   +KTL++ +K
Sbjct: 6   HSIKVPTQYRATAKILKAALEQQKCIKTLIFAEK 39


>AE014297-2635|AAF55642.1|  433|Drosophila melanogaster CG5558-PA,
           isoform A protein.
          Length = 433

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 79  HSVKVPRHYKIAANILKKVSTEGGSVKTLLYDDK 180
           HS+KVP  Y+  A ILK    +   +KTL++ +K
Sbjct: 6   HSIKVPTQYRATAKILKAALEQQKCIKTLIFAEK 39


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,627,571
Number of Sequences: 53049
Number of extensions: 473348
Number of successful extensions: 895
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)