Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B12
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.5  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   4.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.5  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   4.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.8  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   7.8  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   7.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 456 EYDEHGNEID-QHSYTPSQVESEKSSLNLK 542
           +YDE G+E+D  H+Y  + ++ ++  +NLK
Sbjct: 521 KYDEFGHEVDLVHNYM-NFMQMDEFVVNLK 549


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 265 LQNYLSIVWLCSHYHLLHFLVFTT 336
           LQN + I W+   Y LL  ++  T
Sbjct: 85  LQNIIDICWITMVYSLLGIIIAYT 108


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 456 EYDEHGNEID-QHSYTPSQVESEKSSLNLK 542
           +YDE G+E+D  H+Y  + ++ ++  +NLK
Sbjct: 521 KYDEFGHEVDLVHNYM-NFMQMDEFVVNLK 549


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 456 EYDEHGNEID-QHSYTPSQVESEKSSLNLK 542
           +YDE G+E+D  H+Y  + ++ ++  +NLK
Sbjct: 147 KYDEFGHEVDLVHNYM-NFMQMDEFVVNLK 175


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 208 RTVMRVHLYPSKQS*L**CLQNYLSIVWLCSHYHLLH 318
           R +  VH  PSK+     C + Y S+  L +H  + H
Sbjct: 20  RHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYH 56


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 67  KMFEHSVKVPRHYKI 111
           + FEHS K+ RH +I
Sbjct: 155 RAFEHSGKLHRHMRI 169


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 101 CLGTLTECSNILDF 60
           C G +T  +N++DF
Sbjct: 86  CAGVITALNNVIDF 99


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 101 CLGTLTECSNILDF 60
           C G +T  +N++DF
Sbjct: 86  CAGVITALNNVIDF 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,641
Number of Sequences: 438
Number of extensions: 2960
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)