Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_B09
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 29 0.58
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 27 2.3
SPCC895.08c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.1
SPAC2F3.11 |||exopolyphosphatase |Schizosaccharomyces pombe|chr ... 26 4.1
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 26 4.1
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 25 7.2
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 25 9.5
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 25 9.5
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 25 9.5
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.5
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 25 9.5
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 29.1 bits (62), Expect = 0.58
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 490 CMSNESTVHTVSAMSDSTFGIYVLSTSSTPS 398
C+S + + V + D TFG L+T+ TPS
Sbjct: 29 CISIDEVYNVVRKVGDGTFGSVYLATTKTPS 59
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 535 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEP 380
A HQ +P + + +SNE T+ S F Y+ S ST + L+ EP
Sbjct: 181 ASHQI-VPQYSENNPRVSNEPPRVTIENASLKPFSGYIKSHMSTSNFLNGEP 231
>SPCC895.08c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 490
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 63 IKPKLNSSVIYIYIKVNCTYFIMNESFLNPIPEPKKIGVWA----EGTHIEAKEFMIP 224
++ KL I + + + T+F+ N++F N I + G W+ G H EF IP
Sbjct: 261 VEKKLKRYYIRVLLVQSITFFLFNDAFRNSITVLFEDGKWSPPIVPGLHSRV-EFTIP 317
>SPAC2F3.11 |||exopolyphosphatase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 306 IFPSPIYLVDHLSL 265
IF +PIYLVDH SL
Sbjct: 107 IFSNPIYLVDHNSL 120
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 556 MWNGNSDAKHQFELPSWYSSANCMSNE 476
++NG + K +F + SW SS N + E
Sbjct: 251 VFNGKKNRKQRFRIRSWRSSLNFLVKE 277
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -3
Query: 532 KHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 377
K LP+ Y++++ ESTV++ +++S + +L S ++L A L
Sbjct: 49 KQNLNLPNSYTNSSQKVRESTVNSQASLSSNDLRTELLIKSGENAILRANLL 100
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 294 EKEISSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIA 455
E+E L V + V T TEV G D++ + +V+K I K + D+A
Sbjct: 574 EQEGEKLLVLHVSEKDPVGTFTEVLKNPFGLEDALTEMEKVIKNLIDKSKYDLA 627
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 229 NHLNQLTIFLQYQ---T*MIYKIYWRRKYHHYQYLR 327
N +N + L +Q T ++ K+YWR H+Q LR
Sbjct: 112 NIINAPLLMLSFQMAFTSLMVKMYWRFSSVHFQTLR 147
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.0 bits (52), Expect = 9.5
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +3
Query: 156 PEPKKIGVWAEGTHIEAKEFMIPNKSPE 239
P P+++G+W E+K++ + P+
Sbjct: 351 PSPEELGIWLHALKYESKDWSYKTQLPK 378
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -3
Query: 550 NGNSDAKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPLI 374
N +++ KH S S++ S+ H V A +D+T I + + S S+ P +
Sbjct: 17 NSSTNPKHANSESSPLLSSDFSSSSKDYHKVGAFTDNTNAINIPEQTRGVSHTSSSPSV 75
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 251 YSYNTRLR*STRYIGEGNIITTSTYAEEHRNSKHFD 358
Y + +L S + G+GN++TT+ R SK+FD
Sbjct: 464 YEKDWKLDKSESFDGQGNVVTTA-----ERGSKYFD 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,657,545
Number of Sequences: 5004
Number of extensions: 52780
Number of successful extensions: 154
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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