Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B09
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0229 - 22142255-22142344,22142471-22142527,22142621-221427...    32   0.46 
07_03_1685 + 28645284-28645454,28645681-28647069                       30   1.4  
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435...    30   1.4  
11_01_0475 - 3669734-3671452                                           28   5.6  
06_03_0444 + 20864183-20864436,20864831-20865818                       28   5.6  
09_04_0164 + 15265878-15268701,15268782-15269200                       27   9.8  
09_02_0408 - 8638298-8638594,8638717-8639103,8639415-8640413,864...    27   9.8  
01_01_0092 + 722744-723459,723542-723711,723792-724885                 27   9.8  

>03_05_0229 -
           22142255-22142344,22142471-22142527,22142621-22142705,
           22143552-22143677,22143750-22143793,22143877-22143999,
           22144078-22144216,22148795-22151292
          Length = 1053

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 16/64 (25%), Positives = 33/64 (51%)
 Frame = +3

Query: 381 GSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLAEEYQEGNSN*CFASLLPFHIC 560
           G+++    V+E    ++   ESD+  T   V S+ +Q++ E+ + ++  CFA    F   
Sbjct: 302 GTSNEWSSVIEAANEWLALAESDMLTTTAGVASVALQMSYEHLQPDTKRCFAFCALFPEA 361

Query: 561 LQLD 572
            ++D
Sbjct: 362 FEVD 365


>07_03_1685 + 28645284-28645454,28645681-28647069
          Length = 519

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = +3

Query: 327 QKNTETVNTLTEVGGGISGSADSIEGVL---EVLKTYIPKVESDIADTVWTVDSLLMQLA 497
           ++++E V T  E+GG  S +      VL   E  K Y+ +  +D+A+   +V+SL  ++A
Sbjct: 124 RRSSENVETDGELGGLDSQNLQPPSSVLMQLEQAKAYLTRTTADLAEIRASVESLCNEIA 183

Query: 498 EE 503
           +E
Sbjct: 184 KE 185


>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
            42543601-42543744,42543840-42544013,42544056-42544369,
            42544467-42544636,42544916-42545043,42545125-42545185,
            42545473-42545642,42545783-42547387,42547479-42547631,
            42547747-42547905,42548066-42548236,42548357-42548404,
            42548509-42548624,42548885-42549029,42549122-42549220
          Length = 1570

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 550  NGNSDAKHQFELPSWYSSANCMSNESTV 467
            N NSDA  Q + PSWYSS +  +   T+
Sbjct: 1340 NWNSDATQQDDKPSWYSSNSAGTQNFTI 1367


>11_01_0475 - 3669734-3671452
          Length = 572

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +3

Query: 414 VLKTYIPKVESDIADTVWTVDSLLMQLAEEYQEGNSN*CFASLLPFHICLQLDIPTL 584
           ++KT+I +V+    D  WT+D+++   A E    ++       +P H  + +D P L
Sbjct: 339 IIKTWILRVDDGSGDMAWTMDAMVD--ASELWSSHAYAGLPHAIPEHPIVSIDDPHL 393


>06_03_0444 + 20864183-20864436,20864831-20865818
          Length = 413

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +3

Query: 375 ISGSADSIEGVLEVLKTYIP 434
           ++  A SI+GVL+ LKTY+P
Sbjct: 389 VAACAASIQGVLDSLKTYVP 408


>09_04_0164 + 15265878-15268701,15268782-15269200
          Length = 1080

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 567 TVNKCGMVTVMQNISLNCLPGILQLTA*VTNLLSTQYL 454
           T+ KC  +T + N+S N L G++       N  ST YL
Sbjct: 629 TLTKCTTLTYL-NLSYNDLAGVVPTAGVFANFTSTSYL 665


>09_02_0408 -
           8638298-8638594,8638717-8639103,8639415-8640413,
           8640501-8640655,8640768-8640855,8640941-8641044,
           8641199-8641421,8641536-8641620,8641706-8642097,
           8642962-8643150
          Length = 972

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 472 TVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPLI 374
           T H ++ +   +FG YV+S ++ PS + A  L+
Sbjct: 518 TFHVIAELPADSFGAYVISMATAPSDVLAVELL 550


>01_01_0092 + 722744-723459,723542-723711,723792-724885
          Length = 659

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -3

Query: 508 WYSSANCMS--NESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEP 380
           W +  NC    N      V+ +S +T  +YVL+TSS+  + + EP
Sbjct: 136 WATFLNCSRAINNGMYMPVACLSGNTSFVYVLTTSSSYYVQNIEP 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,034,682
Number of Sequences: 37544
Number of extensions: 302593
Number of successful extensions: 661
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)